ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 26581.00 47.78 48.52 94.51 MIR30A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 245095.00 90.70 447.39 92.9 MIR27B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 977.00 0.36 1.78 100.0 MIR27B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 14.00 87.50 0.03 100.0 MIR196A2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 27.00 87.10 0.05 100.0 MIR577-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 179.00 78.17 0.33 88.18 MIR654-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 183.00 94.82 0.33 97.34 MIR204-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 1219.00 92.84 2.23 100.0 MIR152-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 1.00 50.00 0.00 100.0 MIR138-1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 2746.00 88.75 5.01 100.0 MIR30C1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 72.00 79.12 0.13 100.0 MIR660-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 10846.00 73.56 19.80 85.82 MIR125B1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 344.00 2.33 0.63 100.0 MIR125B1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 24.00 23.08 0.04 100.0 MIR493-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 63.00 60.58 0.11 100.0 MIR493-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 12651.61 16.21 23.09 23.14 MIR182-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 48473.35 62.09 88.48 66.25 MIR182-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 31590.00 92.11 57.66 93.8 MIR100-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 166.00 94.86 0.30 100.0 MIR301A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 2505.00 73.46 4.57 88.52 MIR130A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 877.00 25.72 1.60 61.94 MIR130A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 100697.00 98.12 183.81 98.84 MIRLET7F2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 126.00 78.75 0.23 100.0 MIR652-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 6.00 85.71 0.01 100.0 MIR653-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 1795.00 77.67 3.28 100.0 MIR140-201 miRNA esophagus squamous epithelium (Tissue)