ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 1525.00 77.29 2.78 100.0 MIR183-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 1517.00 10.00 2.77 100.0 MIR145-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 10737.00 70.78 19.60 100.0 MIR145-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 7326.00 97.32 13.37 98.55 MIR186-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 4920.00 87.11 8.98 100.0 MIR200B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 55.00 37.67 0.10 100.0 MIR218-1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 2503.00 89.11 4.57 93.15 MIR181B2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 3.00 25.00 0.01 100.0 MIR495-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 673494.00 89.10 1229.36 89.64 MIR10B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 56.33 37.30 0.10 43.33 MIR130B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 18.00 11.92 0.03 100.0 MIR130B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 70.66 46.79 0.13 64.23 MIR130B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 5507.00 37.51 10.05 100.0 MIR199A1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 48.00 75.00 0.09 100.0 MIR487B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 402.84 38.59 0.74 47.06 MIR93-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 567.39 54.35 1.04 56.85 MIR93-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 485.00 78.61 0.89 91.34 MIR532-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 220.00 83.65 0.40 100.0 MIR15B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 544.00 80.47 0.99 100.0 MIR150-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 5.00 55.56 0.01 100.0 MIR542-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 29.00 3.86 0.05 100.0 MIR500A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 548.00 72.97 1.00 100.0 MIR500A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 1528.00 2.75 2.79 100.0 MIR30A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 199.00 0.36 0.36 100.0 MIR30A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 25223.00 45.34 46.04 94.23 MIR30A-201 miRNA esophagus squamous epithelium (Tissue)