ENCFF076JME

Library Details

Organism: Homo Sapiens
Biosample: ovary (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR024CRN
Description: Part of ENCODE experiment ENCSR024CRN. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's female gonad tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 13309.00 0.49 58.60 100.0 SNHG5-273 lncRNA ovary (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 1649466.38 61.24 7262.10 64.2 SNHG5-273 lncRNA ovary (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 135.00 0.01 0.59 100.0 SNHG5-273 lncRNA ovary (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 255.00 0.01 1.12 100.0 SNHG5-273 lncRNA ovary (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 990894.73 36.79 4362.61 37.69 SNHG5-273 lncRNA ovary (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 11216.00 0.42 49.38 90.29 SNHG5-273 lncRNA ovary (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 248.00 0.01 1.09 100.0 SNHG5-273 lncRNA ovary (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 6596.00 0.24 29.04 100.0 SNHG5-273 lncRNA ovary (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 1038.00 0.04 4.57 100.0 SNHG5-273 lncRNA ovary (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 3726.00 0.14 16.40 97.67 SNHG5-273 lncRNA ovary (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 259.00 7.20 1.14 75.51 SNHG14-323 lncRNA ovary (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 6220.00 2.51 27.38 45.66 MEG8-251 lncRNA ovary (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 2776.00 1.12 12.22 89.09 MEG8-251 lncRNA ovary (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 28.00 0.01 0.12 100.0 MEG8-251 lncRNA ovary (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 7635.00 3.09 33.61 58.1 MEG8-251 lncRNA ovary (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 219699.00 88.81 967.27 98.54 MEG8-251 lncRNA ovary (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 29271.00 65.64 128.87 91.66 SNHG14-336 lncRNA ovary (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 13254.00 29.72 58.35 54.82 SNHG14-336 lncRNA ovary (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 15388.00 78.00 67.75 96.52 SNHG14-341 lncRNA ovary (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 198.00 5.51 0.87 100.0 NCL-211 retained intron ovary (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 160.00 31.37 0.70 100.0 FMN2-209 protein coding CDS not defined ovary (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 74.00 3.55 0.33 65.49 LINC02739-203 lncRNA ovary (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 11.00 0.53 0.05 100.0 LINC02739-203 lncRNA ovary (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 39.00 1.87 0.17 34.51 LINC02739-203 lncRNA ovary (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 77.00 3.69 0.34 100.0 LINC02739-203 lncRNA ovary (Tissue)