ENCFF076JME

Library Details

Organism: Homo Sapiens
Biosample: ovary (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR024CRN
Description: Part of ENCODE experiment ENCSR024CRN. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's female gonad tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 122.00 0.01 0.54 100.0 SNHG1-248 lncRNA ovary (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 1574.00 0.17 6.93 100.0 SNHG1-248 lncRNA ovary (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 27.00 0.00 0.12 100.0 SNHG1-248 lncRNA ovary (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 493.00 0.05 2.17 100.0 SNHG1-248 lncRNA ovary (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 1036.00 0.11 4.56 100.0 SNHG1-248 lncRNA ovary (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 38545.00 4.20 169.70 100.0 SNHG1-248 lncRNA ovary (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 239.00 0.03 1.05 100.0 SNHG1-248 lncRNA ovary (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 3416.00 0.37 15.04 100.0 SNHG1-248 lncRNA ovary (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 51705.00 5.64 227.64 81.13 SNHG1-248 lncRNA ovary (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 4.00 0.00 0.02 100.0 SNHG1-248 lncRNA ovary (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 81968.00 8.94 360.88 99.38 SNHG1-248 lncRNA ovary (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 37.00 0.00 0.16 100.0 SNHG1-248 lncRNA ovary (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 43.00 0.00 0.19 100.0 SNHG1-248 lncRNA ovary (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 6552.00 0.71 28.85 100.0 SNHG1-248 lncRNA ovary (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 3194.00 0.35 14.06 81.07 SNHG1-248 lncRNA ovary (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 784.93 0.09 3.46 35.07 SNHG1-248 lncRNA ovary (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 1028.00 0.11 4.53 100.0 SNHG1-248 lncRNA ovary (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 3622.00 0.39 15.95 63.31 SNHG1-248 lncRNA ovary (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 2053.00 0.22 9.04 100.0 SNHG1-248 lncRNA ovary (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 222.00 0.02 0.98 100.0 SNHG1-248 lncRNA ovary (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 18.00 0.00 0.08 100.0 SNHG1-248 lncRNA ovary (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 15643.00 22.82 68.87 100.0 SNHG14-315 lncRNA ovary (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 29006.00 42.32 127.70 92.73 SNHG14-315 lncRNA ovary (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 10734.00 15.66 47.26 81.57 SNHG14-315 lncRNA ovary (Tissue)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 27.00 0.00 0.12 100.0 SNHG5-273 lncRNA ovary (Tissue)