ENCFF076JME

Library Details

Organism: Homo Sapiens
Biosample: ovary (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR024CRN
Description: Part of ENCODE experiment ENCSR024CRN. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's female gonad tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 11861.00 19.44 52.22 63.22 RACK1-230 retained intron ovary (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 47142.00 77.27 207.55 94.52 RACK1-230 retained intron ovary (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 511.00 4.59 2.25 100.0 RNA5SP486-201 rRNA pseudogene ovary (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 3189.00 89.63 14.04 100.0 SCARNA5-201 scaRNA ovary (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 97.00 0.09 0.43 100.0 RNY4-201 misc RNA ovary (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 19625.00 18.61 86.40 76.22 RNY4-201 misc RNA ovary (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 44585.00 42.29 196.29 87.92 RNY4-201 misc RNA ovary (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 43.00 0.04 0.19 100.0 RNY4-201 misc RNA ovary (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 105.00 0.10 0.46 100.0 RNY4-201 misc RNA ovary (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 71.00 0.07 0.31 100.0 RNY4-201 misc RNA ovary (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 21962.00 20.83 96.69 98.89 RNY4-201 misc RNA ovary (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 219.00 0.21 0.96 100.0 RNY4-201 misc RNA ovary (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 267.00 0.25 1.18 23.16 RNY4-201 misc RNA ovary (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 46.00 0.04 0.20 27.54 RNY4-201 misc RNA ovary (Tissue)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 1361.00 1.29 5.99 100.0 RNY4-201 misc RNA ovary (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 2877.00 2.73 12.67 75.24 RNY4-201 misc RNA ovary (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 298.00 69.30 1.31 76.41 MIR3142HG-201 lncRNA ovary (Tissue)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 1068.00 81.22 4.70 100.0 SNHG6-204 retained intron ovary (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 5787.00 9.37 25.48 100.0 MIR151A-201 miRNA ovary (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 50641.00 81.99 222.96 92.02 MIR151A-201 miRNA ovary (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 212.00 97.25 0.93 100.0 DENND3-221 protein coding ovary (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 1280.00 1.79 5.64 100.0 WDR74-204 protein coding ovary (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 779.00 1.09 3.43 62.32 WDR74-204 protein coding ovary (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 711.00 0.99 3.13 58.37 WDR74-204 protein coding ovary (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 471.00 0.66 2.07 37.68 WDR74-204 protein coding ovary (Tissue)