ENCFF076JME

Library Details

Organism: Homo Sapiens
Biosample: ovary (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR024CRN
Description: Part of ENCODE experiment ENCSR024CRN. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's female gonad tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000489392.1 ENST00000489392.1_151_188_+ 151–188 1301.00 17.08 5.73 100.0 RPL7A-207 protein coding CDS not defined ovary (Tissue)
ENST00000489392.1 ENST00000489392.1_116_191_+ 116–191 1715.00 22.51 7.55 66.01 RPL7A-207 protein coding CDS not defined ovary (Tissue)
ENST00000490232.3 ENST00000490232.3_229_300_+ 229–300 99.00 0.98 0.44 3.1 RN7SL2-201 misc RNA ovary (Tissue)
ENST00000490232.3 ENST00000490232.3_219_300_+ 219–300 10.00 0.10 0.04 100.0 RN7SL2-201 misc RNA ovary (Tissue)
ENST00000493449.5 ENST00000493449.5_96_109_+ 96–109 71.00 87.65 0.31 100.0 RGS11-208 retained intron ovary (Tissue)
ENST00000494697.5 ENST00000494697.5_306_348_+ 306–348 12887.00 11.52 56.74 92.18 NOP56-217 protein coding CDS not defined ovary (Tissue)
ENST00000494697.5 ENST00000494697.5_274_348_+ 274–348 74245.00 66.40 326.88 78.53 NOP56-217 protein coding CDS not defined ovary (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2091_+ 2059–2091 508.00 0.19 2.24 100.0 RABGGTB-213 protein coding CDS not defined ovary (Tissue)
ENST00000496055.5 ENST00000496055.5_471_552_+ 471–552 231341.00 86.90 1018.52 94.57 RABGGTB-213 protein coding CDS not defined ovary (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2126_+ 2059–2126 2243.00 0.84 9.88 78.15 RABGGTB-213 protein coding CDS not defined ovary (Tissue)
ENST00000496055.5 ENST00000496055.5_471_515_+ 471–515 973.00 0.37 4.28 58.9 RABGGTB-213 protein coding CDS not defined ovary (Tissue)
ENST00000496055.5 ENST00000496055.5_471_517_+ 471–517 679.00 0.26 2.99 41.1 RABGGTB-213 protein coding CDS not defined ovary (Tissue)
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 3262.00 1.23 14.36 100.0 RABGGTB-213 protein coding CDS not defined ovary (Tissue)
ENST00000496055.5 ENST00000496055.5_493_553_+ 493–553 3527.00 1.32 15.53 100.0 RABGGTB-213 protein coding CDS not defined ovary (Tissue)
ENST00000496254.5 ENST00000496254.5_774_811_+ 774–811 1154.00 25.11 5.08 100.0 GNL3-211 retained intron ovary (Tissue)
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 2950.00 64.20 12.99 100.0 GNL3-211 retained intron ovary (Tissue)
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 2186.00 71.74 9.62 100.0 RPL5-205 retained intron ovary (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 234.00 7.68 1.03 100.0 RPL5-205 retained intron ovary (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 44.00 2.83 0.19 100.0 ZBED9-AS1-201 lncRNA ovary (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 2248.00 92.09 9.90 100.0 RPS3A-206 retained intron ovary (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 7062.00 96.16 31.09 100.0 COX7C-203 protein coding ovary (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 4732.85 7.44 20.84 29.41 RACK1-229 protein coding ovary (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 17026.49 26.76 74.96 80.89 RACK1-229 protein coding ovary (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 30868.00 48.52 135.90 99.87 RACK1-229 protein coding ovary (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 4863.00 7.64 21.41 100.0 RACK1-229 protein coding ovary (Tissue)