ENCFF073SVL

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR316SXP
Description: Part of ENCODE experiment ENCSR316SXP. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 5378.00 39.30 25.78 81.42 MT-TM-201 Mt tRNA transverse colon (Tissue)
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 974.00 27.39 4.67 100.0 MT-TC-201 Mt tRNA transverse colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 19238.00 39.36 92.23 100.0 MT-TY-201 Mt tRNA transverse colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_50_+ 1–50 430.00 0.88 2.06 100.0 MT-TY-201 Mt tRNA transverse colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_28_+ 1–28 2076.00 4.25 9.95 100.0 MT-TY-201 Mt tRNA transverse colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_32_+ 1–32 13135.00 26.88 62.97 84.21 MT-TY-201 Mt tRNA transverse colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_56_+ 1–56 206.00 0.42 0.99 100.0 MT-TY-201 Mt tRNA transverse colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 6961.00 14.24 33.37 83.01 MT-TY-201 Mt tRNA transverse colon (Tissue)
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 1448.00 66.61 6.94 100.0 MT-TD-201 Mt tRNA transverse colon (Tissue)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 207.00 0.15 0.99 100.0 MT-TK-201 Mt tRNA transverse colon (Tissue)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 91543.00 67.19 438.88 100.0 MT-TK-201 Mt tRNA transverse colon (Tissue)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 28236.00 20.72 135.37 100.0 MT-TK-201 Mt tRNA transverse colon (Tissue)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 427.00 0.31 2.05 100.0 MT-TK-201 Mt tRNA transverse colon (Tissue)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 1937.00 10.48 9.29 100.0 MT-TS2-201 Mt tRNA transverse colon (Tissue)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 110.00 0.60 0.53 100.0 MT-TS2-201 Mt tRNA transverse colon (Tissue)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 1994.00 10.79 9.56 87.57 MT-TS2-201 Mt tRNA transverse colon (Tissue)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 1140.00 21.39 5.47 100.0 MT-TL2-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 45.00 0.01 0.22 100.0 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 433530.00 81.43 2078.47 91.45 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 3003.00 0.56 14.40 100.0 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 2821.00 0.53 13.52 100.0 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 1398.00 0.26 6.70 84.37 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 7698.00 1.45 36.91 96.54 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 276.00 0.05 1.32 4.82 MT-TE-201 Mt tRNA transverse colon (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 509.00 48.71 2.44 100.0 MIR196A1-201 miRNA transverse colon (Tissue)