ENCFF073SVL

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR316SXP
Description: Part of ENCODE experiment ENCSR316SXP. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 18.00 0.00 0.09 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 1876.00 47.41 8.99 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 78.00 1.29 0.37 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 64.00 0.58 0.31 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 3205.00 28.80 15.37 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 906.00 8.14 4.34 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA transverse colon (Tissue)