ENCFF062TYF

Library Details

Organism: Homo Sapiens
Biosample: GM23248 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR489KNQ
Description: Part of ENCODE experiment ENCSR489KNQ. The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 289.00 8.01 12.37 92.93 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 7.00 0.19 0.30 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 223.00 6.18 9.55 35.74 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 2.00 0.06 0.09 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 16.00 0.44 0.69 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 13.00 59.09 0.56 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 93.00 0.85 3.98 91.18 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 29.00 38.16 1.24 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 11.00 14.47 0.47 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 13.00 13.98 0.56 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 84.00 5.97 3.60 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 116.00 1.06 4.97 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 27.00 0.25 1.16 30.68 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 2.00 0.98 0.09 6.67 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 28.00 13.66 1.20 100.0 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 16.00 5.52 0.69 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 236.00 6.60 10.10 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 1225.00 34.26 52.45 80.07 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 2.00 2.90 0.09 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 3.00 1.41 0.13 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 11.00 0.19 0.47 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 178.00 10.10 7.62 61.17 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 7.00 0.40 0.30 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 21.00 1.19 0.90 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 8.00 0.45 0.34 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23248 (Cell line)