ENCFF059WHB

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR227FNZ
Description: Part of ENCODE experiment ENCSR227FNZ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 102.00 0.02 0.38 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 2896.00 0.44 10.82 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 7.00 0.00 0.03 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 538.00 0.08 2.01 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 1245.00 0.19 4.65 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 3622.00 0.55 13.53 86.8 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 6166.00 0.93 23.03 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 4075.00 0.62 15.22 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 3321.00 0.50 12.40 83.21 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 16418.00 2.49 61.31 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 378.00 0.06 1.41 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 4954.00 0.75 18.50 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 158038.00 23.92 590.21 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 67.00 0.01 0.25 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 205.00 16.57 0.77 100.0 FTX-219 lncRNA prostate gland (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 601.00 48.59 2.24 92.04 FTX-219 lncRNA prostate gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 253.00 2.80 0.94 61.26 CTC1-214 protein coding prostate gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 321.00 3.56 1.20 93.31 CTC1-214 protein coding prostate gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 923.00 10.23 3.45 86.75 CTC1-214 protein coding prostate gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 160.00 1.77 0.60 38.74 CTC1-214 protein coding prostate gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 614.00 6.80 2.29 69.85 CTC1-214 protein coding prostate gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 62.00 0.69 0.23 100.0 CTC1-214 protein coding prostate gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 101.00 1.12 0.38 100.0 CTC1-214 protein coding prostate gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 75.00 0.83 0.28 100.0 CTC1-214 protein coding prostate gland (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 152.00 0.57 0.57 61.29 ENST00000651540 lncRNA prostate gland (Tissue)