ENCFF059WHB

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR227FNZ
Description: Part of ENCODE experiment ENCSR227FNZ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 285.00 46.34 1.06 100.0 MEG8-222 lncRNA prostate gland (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 160.00 26.02 0.60 100.0 MEG8-222 lncRNA prostate gland (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 26903.00 28.59 100.47 95.56 SNHG14-224 lncRNA prostate gland (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 22820.00 24.25 85.22 87.27 SNHG14-224 lncRNA prostate gland (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 15525.00 16.50 57.98 100.0 SNHG14-224 lncRNA prostate gland (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 5579.00 5.93 20.84 81.15 SNHG14-224 lncRNA prostate gland (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 301.00 0.32 1.12 100.0 SNHG14-224 lncRNA prostate gland (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 5527.00 5.87 20.64 56.94 SNHG14-224 lncRNA prostate gland (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 1314.00 1.40 4.91 79.11 SNHG14-224 lncRNA prostate gland (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 1034.00 1.10 3.86 67.85 SNHG14-224 lncRNA prostate gland (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 6227.55 14.38 23.26 50.17 5S_rRNA.20-201 rRNA pseudogene prostate gland (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 215.00 4.05 0.80 100.0 HSPA9-211 retained intron prostate gland (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 1256.00 23.67 4.69 50.83 HSPA9-211 retained intron prostate gland (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 2921.00 81.05 10.91 100.0 DNM3OS-205 lncRNA prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 593.00 0.09 2.21 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 982.00 0.15 3.67 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 265.00 0.04 0.99 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 527.00 0.08 1.97 85.14 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 1980.00 0.30 7.39 88.67 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 51.00 0.01 0.19 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 250.00 0.04 0.93 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 241.00 0.04 0.90 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 437638.00 66.24 1634.40 99.88 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 226.00 0.03 0.84 100.0 GAS5-230 retained intron prostate gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 3045.00 0.46 11.37 100.0 GAS5-230 retained intron prostate gland (Tissue)