ENCFF059WHB

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR227FNZ
Description: Part of ENCODE experiment ENCSR227FNZ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000585881.5 ENST00000585881.5_104_126_+ 104–126 609.00 22.47 2.27 49.31 NSRP1-214 protein coding prostate gland (Tissue)
ENST00000587762.2 ENST00000587762.2_6337_6420_+ 6337–6420 1234.00 6.87 4.61 100.0 MIR23AHG-201 lncRNA prostate gland (Tissue)
ENST00000587762.2 ENST00000587762.2_6314_6334_+ 6314–6334 3384.00 18.83 12.64 94.03 MIR23AHG-201 lncRNA prostate gland (Tissue)
ENST00000587762.2 ENST00000587762.2_6462_6481_+ 6462–6481 1649.00 9.18 6.16 89.14 MIR23AHG-201 lncRNA prostate gland (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6638_+ 6619–6638 5446.00 30.31 20.34 89.21 MIR23AHG-201 lncRNA prostate gland (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6641_+ 6619–6641 3622.00 20.16 13.53 83.82 MIR23AHG-201 lncRNA prostate gland (Tissue)
ENST00000591345.5 ENST00000591345.5_1414_1429_+ 1414–1429 8.00 10.26 0.03 100.0 ODAD3-204 nonsense mediated decay prostate gland (Tissue)
ENST00000592790.1 ENST00000592790.1_3381_3401_+ 3381–3401 2987.00 2.62 11.16 100.0 VMP1-217 retained intron prostate gland (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3402_+ 3343–3402 288.00 0.25 1.08 100.0 VMP1-217 retained intron prostate gland (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3366_+ 3343–3366 81878.00 71.77 305.78 79.32 VMP1-217 retained intron prostate gland (Tissue)
ENST00000595794.5 ENST00000595794.5_236_279_+ 236–279 592.00 0.07 2.21 100.0 C19orf48P-203 retained intron prostate gland (Tissue)
ENST00000595794.5 ENST00000595794.5_236_318_+ 236–318 610623.98 76.35 2280.43 81.63 C19orf48P-203 retained intron prostate gland (Tissue)
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 157697.27 19.72 588.94 19.97 C19orf48P-203 retained intron prostate gland (Tissue)
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 2323.00 0.29 8.68 89.69 C19orf48P-203 retained intron prostate gland (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 51.00 0.01 0.19 100.0 C19orf48P-203 retained intron prostate gland (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 6.00 0.00 0.02 100.0 C19orf48P-203 retained intron prostate gland (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 3.00 0.25 0.01 100.0 RPS11-206 retained intron prostate gland (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 1075.00 88.11 4.01 100.0 RPS11-206 retained intron prostate gland (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 3411291.00 70.05 12739.80 71.54 CARMN-209 lncRNA prostate gland (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 163.00 13.92 0.61 100.0 ENST00000602478 lncRNA prostate gland (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 766.00 58.25 2.86 100.0 PPFIA1P1-201 processed pseudogene prostate gland (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 642.00 42.04 2.40 100.0 SNORD114-21-201 snoRNA prostate gland (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 647.00 42.37 2.42 100.0 SNORD114-21-201 snoRNA prostate gland (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 415.00 53.55 1.55 100.0 SNORD115-40-201 snoRNA prostate gland (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 12503.00 98.26 46.69 100.0 MIR98-201 miRNA prostate gland (Tissue)