ENCFF059WHB

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR227FNZ
Description: Part of ENCODE experiment ENCSR227FNZ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 105.00 19.70 0.39 100.0 HCN2-201 protein coding prostate gland (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 1.00 8.33 0.00 100.0 SLC49A4-201 protein coding prostate gland (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 120.00 12.44 0.45 100.0 ATP5MC3-201 protein coding prostate gland (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 397.00 74.07 1.48 100.0 CDC25A-201 protein coding prostate gland (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 1388.00 78.86 5.18 100.0 RUNX3-201 protein coding prostate gland (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 325.00 48.58 1.21 100.0 BLOC1S4-201 protein coding prostate gland (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 175.00 13.51 0.65 100.0 ATAD5-201 protein coding prostate gland (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 97.00 8.25 0.36 100.0 SLITRK5-201 protein coding prostate gland (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 7.00 70.00 0.03 100.0 HASPIN-201 protein coding prostate gland (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 679.00 96.86 2.54 100.0 ATG101-201 protein coding prostate gland (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 55.00 61.80 0.21 100.0 PRICKLE1-201 protein coding prostate gland (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 1373.00 89.33 5.13 92.9 MIR133A2-201 miRNA prostate gland (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 4.00 33.33 0.01 100.0 PBLD-204 protein coding prostate gland (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 138663.00 84.63 517.85 96.56 MIRLET7BHG-201 lncRNA prostate gland (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 12894.00 7.87 48.15 83.03 MIRLET7BHG-201 lncRNA prostate gland (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 2787.00 4.55 10.41 68.51 MIR375-201 miRNA prostate gland (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 57047.00 93.05 213.05 96.0 MIR375-201 miRNA prostate gland (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 4487.00 60.07 16.76 100.0 MIR30E-201 miRNA prostate gland (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 2355.00 31.53 8.79 100.0 MIR30E-201 miRNA prostate gland (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 455.00 47.00 1.70 100.0 MIR29A-201 miRNA prostate gland (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 76.00 83.52 0.28 100.0 MIR345-201 miRNA prostate gland (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 11723.00 98.98 43.78 100.0 MIR16-2-201 miRNA prostate gland (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 10.00 0.65 0.04 100.0 MIR340-201 miRNA prostate gland (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 1454.00 94.72 5.43 100.0 MIR340-201 miRNA prostate gland (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 984.00 15.34 3.67 100.0 MIR107-201 miRNA prostate gland (Tissue)