ENCFF059WHB

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR227FNZ
Description: Part of ENCODE experiment ENCSR227FNZ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 24.00 1.41 0.09 3.99 MIR142HG-201 lncRNA prostate gland (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 8.00 0.47 0.03 100.0 MIR142HG-201 lncRNA prostate gland (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 1276.00 74.88 4.77 81.02 MIR142HG-201 lncRNA prostate gland (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 49.45 0.02 0.18 32.11 RPL23A-208 retained intron prostate gland (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 247497.00 83.50 924.30 88.97 RPL23A-208 retained intron prostate gland (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 47072.00 15.88 175.79 92.25 RPL23A-208 retained intron prostate gland (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 175.42 0.06 0.66 76.27 RPL23A-208 retained intron prostate gland (Tissue)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 205.00 11.45 0.77 100.0 MIR133A1HG-202 lncRNA prostate gland (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 2651.00 4.29 9.90 61.44 RPL17-211 retained intron prostate gland (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 7564.00 12.23 28.25 50.72 RPL17-211 retained intron prostate gland (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 192.00 0.31 0.72 100.0 RPL17-211 retained intron prostate gland (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 38870.00 62.86 145.16 95.66 RPL17-211 retained intron prostate gland (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 10192.00 16.48 38.06 94.63 RPL17-211 retained intron prostate gland (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 2972.00 36.48 11.10 41.88 ENST00000582320 lncRNA prostate gland (Tissue)
ENST00000582320.4 ENST00000582320.4_395_417_+ 395–417 69.00 0.85 0.26 100.0 ENST00000582320 lncRNA prostate gland (Tissue)
ENST00000582320.4 ENST00000582320.4_575_600_+ 575–600 150.00 1.84 0.56 100.0 ENST00000582320 lncRNA prostate gland (Tissue)
ENST00000582588.1 ENST00000582588.1_258_286_+ 258–286 814.00 5.34 3.04 100.0 RPL17-214 retained intron prostate gland (Tissue)
ENST00000582588.1 ENST00000582588.1_258_318_+ 258–318 7033.39 46.18 26.27 55.31 RPL17-214 retained intron prostate gland (Tissue)
ENST00000582588.1 ENST00000582588.1_258_320_+ 258–320 6220.58 40.84 23.23 45.58 RPL17-214 retained intron prostate gland (Tissue)
ENST00000583861.1 ENST00000583861.1_1_62_+ 1–62 412222.00 98.99 1539.48 99.93 SNORD43-201 snoRNA prostate gland (Tissue)
ENST00000583861.1 ENST00000583861.1_12_62_+ 12–62 35.00 0.01 0.13 100.0 SNORD43-201 snoRNA prostate gland (Tissue)
ENST00000584249.1 ENST00000584249.1_60_79_+ 60–79 55.00 42.64 0.21 100.0 MIR151B-201 miRNA prostate gland (Tissue)
ENST00000584923.1 ENST00000584923.1_153_216_+ 153–216 82.00 2.16 0.31 100.0 SNORD3A-201 snoRNA prostate gland (Tissue)
ENST00000585078.1 ENST00000585078.1_1_83_+ 1–83 2203.00 79.62 8.23 100.0 SNORD92-201 snoRNA prostate gland (Tissue)
ENST00000585881.5 ENST00000585881.5_140_162_+ 140–162 843.00 31.11 3.15 100.0 NSRP1-214 protein coding prostate gland (Tissue)