ENCFF059WHB

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR227FNZ
Description: Part of ENCODE experiment ENCSR227FNZ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485101.5 ENST00000485101.5_343_390_+ 343–390 2325.00 1.09 8.68 84.15 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 20591.00 9.63 76.90 82.74 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 190.00 0.09 0.71 100.0 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 118203.00 55.26 441.44 97.54 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 741.00 0.35 2.77 100.0 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 4063.00 1.90 15.17 66.32 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_434_+ 343–434 12.00 0.01 0.04 100.0 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 484.00 0.23 1.81 100.0 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 24881.00 98.56 92.92 100.0 RPS8-207 protein coding CDS not defined prostate gland (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 254.00 28.77 0.95 100.0 RPL7A-206 protein coding CDS not defined prostate gland (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 216.00 24.46 0.81 100.0 RPL7A-206 protein coding CDS not defined prostate gland (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 42.00 4.76 0.16 100.0 RPL7A-206 protein coding CDS not defined prostate gland (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 4.00 0.00 0.01 100.0 RPL21-209 retained intron prostate gland (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 2217.00 0.73 8.28 100.0 RPL21-209 retained intron prostate gland (Tissue)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 112391.00 37.05 419.74 94.11 RPL21-209 retained intron prostate gland (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 273.00 0.09 1.02 100.0 RPL21-209 retained intron prostate gland (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 184563.00 60.85 689.27 99.68 RPL21-209 retained intron prostate gland (Tissue)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 167.00 28.84 0.62 100.0 GABRE-209 retained intron prostate gland (Tissue)
ENST00000488946.1 ENST00000488946.1_804_886_+ 804–886 47909.00 63.21 178.92 78.47 RPL13A-212 retained intron prostate gland (Tissue)
ENST00000488946.1 ENST00000488946.1_197_235_+ 197–235 172.00 0.23 0.64 100.0 RPL13A-212 retained intron prostate gland (Tissue)
ENST00000488946.1 ENST00000488946.1_1363_1444_+ 1363–1444 107.00 0.14 0.40 100.0 RPL13A-212 retained intron prostate gland (Tissue)
ENST00000488946.1 ENST00000488946.1_1095_1159_+ 1095–1159 103.00 0.14 0.38 100.0 RPL13A-212 retained intron prostate gland (Tissue)
ENST00000488946.1 ENST00000488946.1_1364_1441_+ 1364–1441 222.00 0.29 0.83 81.62 RPL13A-212 retained intron prostate gland (Tissue)
ENST00000488946.1 ENST00000488946.1_155_235_+ 155–235 6749.00 8.90 25.20 99.18 RPL13A-212 retained intron prostate gland (Tissue)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 26.00 0.03 0.10 100.0 RPL13A-212 retained intron prostate gland (Tissue)