ENCFF059WHB

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR227FNZ
Description: Part of ENCODE experiment ENCSR227FNZ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000458892.1 ENST00000458892.1_5_80_+ 5–80 65636.00 97.61 245.12 99.23 SNORD127-201 snoRNA prostate gland (Tissue)
ENST00000458893.1 ENST00000458893.1_3_64_+ 3–64 25224.00 96.62 94.20 100.0 SNORD42B-201 snoRNA prostate gland (Tissue)
ENST00000459254.1 ENST00000459254.1_69_90_+ 69–90 4221.00 26.38 15.76 100.0 RNY4P25-201 misc RNA prostate gland (Tissue)
ENST00000459386.1 ENST00000459386.1_9_73_+ 9–73 346.00 82.97 1.29 100.0 SNORD121A-201 snoRNA prostate gland (Tissue)
ENST00000459475.1 ENST00000459475.1_4_72_+ 4–72 2156.00 81.73 8.05 93.9 SNORD126-201 snoRNA prostate gland (Tissue)
ENST00000459475.1 ENST00000459475.1_4_75_+ 4–75 391.00 14.82 1.46 69.2 SNORD126-201 snoRNA prostate gland (Tissue)
ENST00000459577.1 ENST00000459577.1_12_91_+ 12–91 10180.00 92.04 38.02 95.84 SNORD124-201 snoRNA prostate gland (Tissue)
ENST00000461448.6 ENST00000461448.6_522_587_+ 522–587 409.00 19.74 1.53 100.0 SNHG12-201 retained intron prostate gland (Tissue)
ENST00000467105.1 ENST00000467105.1_582_665_+ 582–665 3850.00 40.33 14.38 100.0 RPL3-212 retained intron prostate gland (Tissue)
ENST00000467105.1 ENST00000467105.1_581_668_+ 581–668 2585.00 27.08 9.65 75.52 RPL3-212 retained intron prostate gland (Tissue)
ENST00000469129.1 ENST00000469129.1_822_842_+ 822–842 2917.00 97.36 10.89 100.0 SMC1A-204 retained intron prostate gland (Tissue)
ENST00000471759.5 ENST00000471759.5_372_449_+ 372–449 42644.00 94.01 159.26 99.11 RABGGTB-208 protein coding CDS not defined prostate gland (Tissue)
ENST00000481456.1 ENST00000481456.1_862_898_+ 862–898 220.00 7.23 0.82 100.0 DDX39B-219 retained intron prostate gland (Tissue)
ENST00000481456.1 ENST00000481456.1_847_901_+ 847–901 23.00 0.76 0.09 100.0 DDX39B-219 retained intron prostate gland (Tissue)
ENST00000481456.1 ENST00000481456.1_825_898_+ 825–898 1687.00 55.46 6.30 78.07 DDX39B-219 retained intron prostate gland (Tissue)
ENST00000484599.1 ENST00000484599.1_580_645_+ 580–645 4392.00 89.11 16.40 100.0 RPS8-206 protein coding CDS not defined prostate gland (Tissue)
ENST00000484610.5 ENST00000484610.5_361_433_+ 361–433 85685.00 96.80 320.00 99.54 RPL13-207 retained intron prostate gland (Tissue)
ENST00000484610.5 ENST00000484610.5_392_433_+ 392–433 941.00 1.06 3.51 100.0 RPL13-207 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 4063.00 1.90 15.17 66.32 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_434_+ 343–434 12.00 0.01 0.04 100.0 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 484.00 0.23 1.81 100.0 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 34194.00 15.98 127.70 83.65 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 197.00 0.09 0.74 29.76 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 1168.00 0.55 4.36 51.5 EIF4A2-219 retained intron prostate gland (Tissue)
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 2237.00 1.05 8.35 76.01 EIF4A2-219 retained intron prostate gland (Tissue)