ENCFF004BLT

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 7.00 1.29 0.01 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 110532.00 41.55 132.64 88.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 122.00 0.05 0.15 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 31211.00 11.73 37.45 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 2209.00 46.14 2.65 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 962.00 1.00 1.15 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 10130.00 10.52 12.16 84.35 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 294.00 0.31 0.35 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 8320.00 8.64 9.98 91.78 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 4368.00 4.54 5.24 40.01 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 9.00 0.01 0.01 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 457.00 0.47 0.55 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 22.00 22.22 0.03 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 63704.00 61.15 76.45 98.59 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 20.00 3.23 0.02 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 104.00 16.80 0.12 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 238.00 11.94 0.29 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 580.00 4.28 0.70 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 503.00 0.48 0.60 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 8427.00 8.09 10.11 77.45 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 15.00 0.59 0.02 12.1 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 109.00 4.29 0.13 91.6 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 137.00 2.97 0.16 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 6276.00 6.54 7.53 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 37339.00 38.89 44.81 94.98 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA GM23338 (Cell line)