ENCFF004BLT

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 431.00 2.90 0.52 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 173.00 5.26 0.21 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 114.00 0.09 0.14 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 2106.00 5.61 2.53 66.46 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 244.00 0.65 0.29 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 53.00 0.14 0.06 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 218.00 0.58 0.26 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 2919.00 7.77 3.50 67.9 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 450.00 1.20 0.54 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 5352.00 30.37 6.42 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 1479.00 8.39 1.77 55.17 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 3370.00 21.46 4.04 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 51.00 0.05 0.06 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 15.00 0.02 0.02 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 812.00 0.83 0.97 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 87357.00 89.16 104.83 97.12 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 1188.00 1.21 1.43 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 2843.00 20.96 3.41 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 22013.00 66.96 26.42 86.3 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 1004.00 9.10 1.20 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 1.00 0.06 0.00 33.33 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 97.00 5.84 0.12 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 3.00 0.18 0.00 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 607.00 36.57 0.73 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA GM23338 (Cell line)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 248.00 0.58 0.30 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA GM23338 (Cell line)