ENCFF004BLT

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 461.00 90.04 0.55 100.0 MIR577-201 miRNA GM23338 (Cell line)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 2.00 100.00 0.00 100.0 MIR654-201 miRNA GM23338 (Cell line)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 2338.00 97.58 2.81 98.61 MIR204-201 miRNA GM23338 (Cell line)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 17.00 89.47 0.02 100.0 MIR152-201 miRNA GM23338 (Cell line)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 65.00 55.56 0.08 100.0 MIR138-1-201 miRNA GM23338 (Cell line)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 1149.00 91.26 1.38 100.0 MIR30C1-201 miRNA GM23338 (Cell line)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 47.00 71.21 0.06 100.0 MIR660-201 miRNA GM23338 (Cell line)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 45.00 46.39 0.05 100.0 MIR125B1-201 miRNA GM23338 (Cell line)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 45.00 46.39 0.05 100.0 MIR125B1-201 miRNA GM23338 (Cell line)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 15731.34 11.26 18.88 18.29 MIR182-201 miRNA GM23338 (Cell line)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 90887.40 65.05 109.07 68.35 MIR182-201 miRNA GM23338 (Cell line)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 116.00 95.87 0.14 99.15 MIR100-201 miRNA GM23338 (Cell line)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 1145.00 95.26 1.37 100.0 MIR301A-201 miRNA GM23338 (Cell line)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 5007.00 70.06 6.01 85.81 MIR130A-201 miRNA GM23338 (Cell line)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 2054.00 28.74 2.46 54.58 MIR130A-201 miRNA GM23338 (Cell line)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 54.00 93.10 0.06 100.0 MIRLET7F2-201 miRNA GM23338 (Cell line)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 85.00 75.22 0.10 100.0 MIR652-201 miRNA GM23338 (Cell line)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 93.00 94.90 0.11 100.0 MIR653-201 miRNA GM23338 (Cell line)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 591.00 61.31 0.71 100.0 MIR140-201 miRNA GM23338 (Cell line)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 177.00 11.27 0.21 100.0 MIR106B-201 miRNA GM23338 (Cell line)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 193.00 12.29 0.23 55.94 MIR106B-201 miRNA GM23338 (Cell line)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 57530.00 86.46 69.04 99.33 SNORD83A-201 snoRNA GM23338 (Cell line)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 3631.00 5.46 4.36 85.82 SNORD83A-201 snoRNA GM23338 (Cell line)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 10278.00 89.17 12.33 100.0 SNORD41-201 snoRNA GM23338 (Cell line)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 158.00 2.69 0.19 61.24 MT-TF-201 Mt tRNA GM23338 (Cell line)