ENCFF004BLT
Library Details
| Organism: | Homo Sapiens |
|---|---|
| Biosample: | GM23338 (Cell line) |
| GEO DB ID: | Not available |
| ENCODE Experiment ID: | ENCSR722POQ |
| Description: | Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning. |
|---|---|
| Author: | Thomas Gingeras, CSHL |
sncRNAs in this Library
| Precursor Transcript ID | sncRNA Name | sncRNA position in precursor | Expression | Expression Fraction | Expression (CPM) | Prominence | Transcript Name | Transcript Type | Biosample |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000387314.1 | ENST00000387314.1_1_54_+ | 1–54 | 61.00 | 1.04 | 0.07 | 100.0 | MT-TF-201 | Mt tRNA | GM23338 (Cell line) |
| ENST00000387314.1 | ENST00000387314.1_35_54_+ | 35–54 | 158.00 | 2.69 | 0.19 | 61.24 | MT-TF-201 | Mt tRNA | GM23338 (Cell line) |
| ENST00000387342.1 | ENST00000387342.1_1_53_+ | 1–53 | 1415.00 | 16.97 | 1.70 | 100.0 | MT-TV-201 | Mt tRNA | GM23338 (Cell line) |
| ENST00000387347.2 | ENST00000387347.2_1297_1329_+ | 1297–1329 | 229.00 | 0.30 | 0.27 | 100.0 | MT-RNR2-201 | Mt rRNA | GM23338 (Cell line) |
| ENST00000387347.2 | ENST00000387347.2_1500_1531_+ | 1500–1531 | 239.00 | 0.31 | 0.29 | 90.87 | MT-RNR2-201 | Mt rRNA | GM23338 (Cell line) |
| ENST00000387347.2 | ENST00000387347.2_74_96_+ | 74–96 | 5.00 | 0.01 | 0.01 | 100.0 | MT-RNR2-201 | Mt rRNA | GM23338 (Cell line) |
| ENST00000387347.2 | ENST00000387347.2_1132_1147_+ | 1132–1147 | 320.00 | 0.42 | 0.38 | 100.0 | MT-RNR2-201 | Mt rRNA | GM23338 (Cell line) |
| ENST00000387347.2 | ENST00000387347.2_1357_1376_+ | 1357–1376 | 736.00 | 0.97 | 0.88 | 100.0 | MT-RNR2-201 | Mt rRNA | GM23338 (Cell line) |
| ENST00000387347.2 | ENST00000387347.2_1500_1528_+ | 1500–1528 | 124.00 | 0.16 | 0.15 | 75.15 | MT-RNR2-201 | Mt rRNA | GM23338 (Cell line) |
| ENST00000387347.2 | ENST00000387347.2_1500_1559_+ | 1500–1559 | 215.00 | 0.28 | 0.26 | 100.0 | MT-RNR2-201 | Mt rRNA | GM23338 (Cell line) |
| ENST00000387365.1 | ENST00000387365.1_1_58_+ | 1–58 | 1097.00 | 33.42 | 1.32 | 100.0 | MT-TI-201 | Mt tRNA | GM23338 (Cell line) |
| ENST00000387365.1 | ENST00000387365.1_1_51_+ | 1–51 | 647.00 | 19.71 | 0.78 | 93.9 | MT-TI-201 | Mt tRNA | GM23338 (Cell line) |
| ENST00000387372.1 | ENST00000387372.1_1_30_+ | 1–30 | 8630.48 | 20.51 | 10.36 | 66.08 | MT-TQ-201 | Mt tRNA | GM23338 (Cell line) |
| ENST00000387372.1 | ENST00000387372.1_1_32_+ | 1–32 | 12099.35 | 28.76 | 14.52 | 58.08 | MT-TQ-201 | Mt tRNA | GM23338 (Cell line) |
| ENST00000387372.1 | ENST00000387372.1_1_55_+ | 1–55 | 79.00 | 0.19 | 0.09 | 100.0 | MT-TQ-201 | Mt tRNA | GM23338 (Cell line) |
| ENST00000387372.1 | ENST00000387372.1_1_36_+ | 1–36 | 10614.00 | 25.23 | 12.74 | 82.15 | MT-TQ-201 | Mt tRNA | GM23338 (Cell line) |
| ENST00000387377.1 | ENST00000387377.1_1_51_+ | 1–51 | 492.00 | 10.49 | 0.59 | 100.0 | MT-TM-201 | Mt tRNA | GM23338 (Cell line) |
| ENST00000387377.1 | ENST00000387377.1_1_31_+ | 1–31 | 1915.00 | 40.84 | 2.30 | 82.12 | MT-TM-201 | Mt tRNA | GM23338 (Cell line) |
| ENST00000387405.1 | ENST00000387405.1_1_24_+ | 1–24 | 505.00 | 36.15 | 0.61 | 100.0 | MT-TC-201 | Mt tRNA | GM23338 (Cell line) |
| ENST00000387409.1 | ENST00000387409.1_1_28_+ | 1–28 | 3430.00 | 2.79 | 4.12 | 100.0 | MT-TY-201 | Mt tRNA | GM23338 (Cell line) |
| ENST00000387409.1 | ENST00000387409.1_1_32_+ | 1–32 | 3948.00 | 3.22 | 4.74 | 87.06 | MT-TY-201 | Mt tRNA | GM23338 (Cell line) |
| ENST00000387409.1 | ENST00000387409.1_1_56_+ | 1–56 | 252.00 | 0.21 | 0.30 | 100.0 | MT-TY-201 | Mt tRNA | GM23338 (Cell line) |
| ENST00000387409.1 | ENST00000387409.1_1_37_+ | 1–37 | 740.00 | 0.60 | 0.89 | 70.54 | MT-TY-201 | Mt tRNA | GM23338 (Cell line) |
| ENST00000387409.1 | ENST00000387409.1_1_50_+ | 1–50 | 17.00 | 0.01 | 0.02 | 100.0 | MT-TY-201 | Mt tRNA | GM23338 (Cell line) |
| ENST00000387409.1 | ENST00000387409.1_1_65_+ | 1–65 | 108395.00 | 88.28 | 130.08 | 100.0 | MT-TY-201 | Mt tRNA | GM23338 (Cell line) |