ENCFF004BLT

Library Details

Organism: Homo Sapiens
Biosample: GM23338 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR722POQ
Description: Part of ENCODE experiment ENCSR722POQ. The libraries contained in this experiment come from independent growths of an induced pluripotent cell line, iPSC. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 16066.00 83.49 19.28 100.0 MIR183-201 miRNA GM23338 (Cell line)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 5.00 83.33 0.01 100.0 MIR145-201 miRNA GM23338 (Cell line)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 4256.00 94.41 5.11 96.88 MIR186-201 miRNA GM23338 (Cell line)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 948.00 95.47 1.14 100.0 MIR200B-201 miRNA GM23338 (Cell line)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 24.00 75.00 0.03 100.0 MIR218-1-201 miRNA GM23338 (Cell line)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 302.00 91.79 0.36 95.27 MIR181B2-201 miRNA GM23338 (Cell line)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 466.00 89.44 0.56 89.79 MIR10B-201 miRNA GM23338 (Cell line)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 531.00 17.61 0.64 100.0 MIR130B-201 miRNA GM23338 (Cell line)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 1202.90 39.88 1.44 58.97 MIR130B-201 miRNA GM23338 (Cell line)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 1049.66 34.80 1.26 44.18 MIR130B-201 miRNA GM23338 (Cell line)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 1374.64 22.38 1.65 27.79 MIR93-201 miRNA GM23338 (Cell line)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 4422.65 72.00 5.31 75.74 MIR93-201 miRNA GM23338 (Cell line)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 256.00 89.51 0.31 97.71 MIR532-201 miRNA GM23338 (Cell line)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 412.00 93.85 0.49 100.0 MIR15B-201 miRNA GM23338 (Cell line)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 32.00 91.43 0.04 100.0 MIR150-201 miRNA GM23338 (Cell line)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 14.00 56.00 0.02 100.0 MIR542-201 miRNA GM23338 (Cell line)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 4.00 0.46 0.00 100.0 MIR500A-201 miRNA GM23338 (Cell line)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 712.00 82.60 0.85 100.0 MIR500A-201 miRNA GM23338 (Cell line)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 2173.00 94.77 2.61 99.36 MIR30A-201 miRNA GM23338 (Cell line)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 54.00 2.35 0.06 100.0 MIR30A-201 miRNA GM23338 (Cell line)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 21.00 0.92 0.03 100.0 MIR30A-201 miRNA GM23338 (Cell line)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 17.00 0.74 0.02 54.84 MIR30A-201 miRNA GM23338 (Cell line)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 2845.00 87.86 3.41 90.89 MIR27B-201 miRNA GM23338 (Cell line)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 43.00 1.33 0.05 100.0 MIR27B-201 miRNA GM23338 (Cell line)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 1.00 100.00 0.00 100.0 MIR196A2-201 miRNA GM23338 (Cell line)