ENCFF001RTU

Library Details

Organism: Homo Sapiens
Biosample: liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFV
Description: Part of ENCODE experiment ENCSR000AFV. The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 1322.00 5.14 3.94 100.0 SNORD104-201 snoRNA liver (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 5853.00 22.78 17.45 100.0 SNORD104-201 snoRNA liver (Tissue)
ENST00000362912.1 ENST00000362912.1_2_82_+ 2–82 21640.00 52.77 64.51 95.9 SNORD115-9-201 snoRNA liver (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 9938.00 57.50 29.63 92.9 RNA5SP358-201 rRNA pseudogene liver (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 75.00 0.89 0.22 79.79 RNA5SP145-201 rRNA pseudogene liver (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 117.00 13.93 0.35 100.0 Y_RNA.105-201 misc RNA liver (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 329.00 10.02 0.98 100.0 RNY4P9-201 misc RNA liver (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 1431.00 2.41 4.27 100.0 RNU5B-1-201 snRNA liver (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 3750.00 6.32 11.18 100.0 RNU5B-1-201 snRNA liver (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 1032.00 1.74 3.08 100.0 RNU5B-1-201 snRNA liver (Tissue)
ENST00000363286.1 ENST00000363286.1_1_78_+ 1–78 6548.00 11.03 19.52 87.89 RNU5B-1-201 snRNA liver (Tissue)
ENST00000363286.1 ENST00000363286.1_1_69_+ 1–69 171.00 0.29 0.51 100.0 RNU5B-1-201 snRNA liver (Tissue)
ENST00000363286.1 ENST00000363286.1_1_86_+ 1–86 11373.00 19.16 33.90 100.0 RNU5B-1-201 snRNA liver (Tissue)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 70243.00 89.67 209.39 97.4 SNORD115-18-201 snoRNA liver (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 10526.00 51.87 31.38 95.53 RNY4P27-201 misc RNA liver (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 2692.00 13.27 8.02 84.55 RNY4P27-201 misc RNA liver (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 431.00 11.01 1.28 100.0 Y_RNA.136-201 misc RNA liver (Tissue)
ENST00000363608.1 ENST00000363608.1_2_82_+ 2–82 9299.00 35.01 27.72 100.0 SNORD115-41-201 snoRNA liver (Tissue)
ENST00000363633.1 ENST00000363633.1_2_82_+ 2–82 4043.00 18.68 12.05 100.0 SNORD115-5-201 snoRNA liver (Tissue)
ENST00000363723.1 ENST00000363723.1_2_82_+ 2–82 3727.00 35.01 11.11 100.0 SNORD115-33-201 snoRNA liver (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 198538.00 89.14 591.84 95.01 SNORD114-25-201 snoRNA liver (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 400563.00 95.72 1194.08 100.0 SNORD113-7-201 snoRNA liver (Tissue)
ENST00000363856.1 ENST00000363856.1_2_82_+ 2–82 4247.00 24.46 12.66 100.0 SNORD115-8-201 snoRNA liver (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 196.00 19.27 0.58 100.0 Y_RNA.181-201 misc RNA liver (Tissue)
ENST00000363887.1 ENST00000363887.1_2_82_+ 2–82 8361.00 34.18 24.92 100.0 SNORD115-16-201 snoRNA liver (Tissue)