ENCFF001RTU

Library Details

Organism: Homo Sapiens
Biosample: liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFV
Description: Part of ENCODE experiment ENCSR000AFV. The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 210.00 15.54 0.63 100.0 ENST00000837997 lncRNA liver (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 2527.00 76.34 7.53 84.26 ENST00000839036 lncRNA liver (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 45.00 17.72 0.13 100.0 ENST00000849527 lncRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 25554.00 72.48 76.18 81.51 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 6.00 0.02 0.02 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 720.00 0.20 2.15 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 1865.00 73.54 5.56 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 138.00 5.44 0.41 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 66.00 7.88 0.20 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 72.00 2.81 0.21 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 1009.00 56.37 3.01 89.45 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 126.00 0.04 0.38 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 13.00 16.88 0.04 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 2349.00 24.50 7.00 97.67 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 24.00 0.25 0.07 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 1049.00 10.94 3.13 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 2453.00 18.60 7.31 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 2374.00 1.33 7.08 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 545.00 0.31 1.62 90.23 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 96.00 0.05 0.29 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 74.00 0.04 0.22 66.67 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 46530.00 26.16 138.71 54.72 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 585.00 0.33 1.74 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 33.00 0.02 0.10 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA liver (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 144.00 32.51 0.43 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA liver (Tissue)