ENCFF001RTU

Library Details

Organism: Homo Sapiens
Biosample: liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFV
Description: Part of ENCODE experiment ENCSR000AFV. The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 2165.00 3.79 6.45 100.0 ENST00000823279 lncRNA liver (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 867.71 1.52 2.59 47.36 ENST00000823279 lncRNA liver (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 1889.14 3.31 5.63 54.41 ENST00000823279 lncRNA liver (Tissue)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 2713.00 4.75 8.09 100.0 ENST00000823279 lncRNA liver (Tissue)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 6522.00 11.42 19.44 98.76 ENST00000823279 lncRNA liver (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 1668.73 2.92 4.97 44.85 ENST00000823279 lncRNA liver (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 2039.27 3.57 6.08 40.21 ENST00000823279 lncRNA liver (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 2905.00 5.09 8.66 81.58 ENST00000823279 lncRNA liver (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 6253.15 10.95 18.64 55.75 ENST00000823279 lncRNA liver (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 3632.65 6.36 10.83 31.54 ENST00000823801 lncRNA liver (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 589.00 36.20 1.76 40.9 ENST00000827714 lncRNA liver (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 851.00 52.30 2.54 59.1 ENST00000827714 lncRNA liver (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 10171.00 10.52 30.32 100.0 GAS5-377 lncRNA liver (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 517.00 0.53 1.54 100.0 GAS5-377 lncRNA liver (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 541.00 0.56 1.61 100.0 GAS5-377 lncRNA liver (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 82143.00 84.95 244.87 100.0 GAS5-377 lncRNA liver (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 43.00 86.00 0.13 100.0 MIR205HG-245 lncRNA liver (Tissue)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 644.00 14.31 1.92 100.0 TAF12-DT-204 lncRNA liver (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 218739.00 94.88 652.06 99.81 ZFAS1-238 lncRNA liver (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 659.00 0.29 1.96 100.0 ZFAS1-238 lncRNA liver (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 2368.00 1.03 7.06 100.0 ZFAS1-238 lncRNA liver (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 931.00 0.40 2.78 100.0 ZFAS1-238 lncRNA liver (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 2703.00 4.25 8.06 100.0 ZFAS1-242 lncRNA liver (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 58069.00 91.37 173.10 100.0 ZFAS1-242 lncRNA liver (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 653.00 48.33 1.95 100.0 ENST00000837997 lncRNA liver (Tissue)