ENCFF001RTU

Library Details

Organism: Homo Sapiens
Biosample: liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFV
Description: Part of ENCODE experiment ENCSR000AFV. The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 3358.56 7.47 10.01 84.64 ENST00000756336 lncRNA liver (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 1216.00 91.77 3.62 100.0 ENST00000756452 lncRNA liver (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 1601.00 46.07 4.77 100.0 ENST00000760093 lncRNA liver (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 76.00 2.19 0.23 100.0 ENST00000760093 lncRNA liver (Tissue)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 68043.00 80.42 202.84 90.86 SNHG14-356 lncRNA liver (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 2660.00 13.58 7.93 64.24 LINC02806-241 lncRNA liver (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 92.00 0.47 0.27 100.0 LINC02806-241 lncRNA liver (Tissue)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 1.00 0.01 0.00 100.0 LINC02806-241 lncRNA liver (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 9966.00 50.87 29.71 77.99 LINC02806-241 lncRNA liver (Tissue)
ENST00000762395.1 ENST00000762395.1_307_324_+ 307–324 5.00 0.03 0.01 100.0 LINC02806-241 lncRNA liver (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 5676.00 90.32 16.92 100.0 EHBP1-AS1-210 lncRNA liver (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 401.00 20.41 1.20 100.0 ENST00000770398 lncRNA liver (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 1012.00 51.50 3.02 100.0 ENST00000770398 lncRNA liver (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 41.00 2.09 0.12 100.0 ENST00000770398 lncRNA liver (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 95.00 0.25 0.28 100.0 ENST00000771298 lncRNA liver (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 84.00 0.22 0.25 100.0 ENST00000771298 lncRNA liver (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 31954.00 84.54 95.25 94.51 ENST00000771298 lncRNA liver (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 146.00 0.39 0.44 100.0 ENST00000771298 lncRNA liver (Tissue)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 2945.00 48.98 8.78 100.0 ENST00000772672 lncRNA liver (Tissue)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 6.00 0.10 0.02 100.0 ENST00000772672 lncRNA liver (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 168.00 2.79 0.50 100.0 ENST00000772672 lncRNA liver (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 8231.00 80.23 24.54 100.0 ENST00000773843 lncRNA liver (Tissue)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 22.00 0.02 0.07 100.0 SNHG12-223 lncRNA liver (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 17714.00 18.89 52.81 86.79 SNHG12-223 lncRNA liver (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 75231.00 80.23 224.26 99.52 SNHG12-223 lncRNA liver (Tissue)