ENCFF001RTU

Library Details

Organism: Homo Sapiens
Biosample: liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFV
Description: Part of ENCODE experiment ENCSR000AFV. The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 724.00 17.98 2.16 100.0 SNHG16-266 lncRNA liver (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 834.00 20.71 2.49 100.0 SNHG16-266 lncRNA liver (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 365.00 9.06 1.09 100.0 SNHG16-266 lncRNA liver (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 156.00 3.87 0.47 100.0 SNHG16-266 lncRNA liver (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 1377.00 45.24 4.10 100.0 MEG8-261 lncRNA liver (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 1783.00 64.81 5.32 100.0 NR2F2-AS1-327 lncRNA liver (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 755.00 6.86 2.25 42.34 ENST00000747675 lncRNA liver (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 4331.00 39.33 12.91 100.0 ENST00000747675 lncRNA liver (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 555.00 5.04 1.65 42.37 ENST00000747675 lncRNA liver (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 473.00 4.30 1.41 38.52 ENST00000747675 lncRNA liver (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 695.00 6.31 2.07 100.0 ENST00000747675 lncRNA liver (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 5516.00 25.97 16.44 89.97 SNHG26-250 lncRNA liver (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 4216.00 19.85 12.57 57.36 SNHG26-250 lncRNA liver (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 83.00 4.69 0.25 100.0 LINC02422-207 lncRNA liver (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 167.00 1.28 0.50 100.0 ENST00000753088 lncRNA liver (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 1559.00 11.95 4.65 100.0 ENST00000753088 lncRNA liver (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 1570.15 3.49 4.68 26.31 ENST00000756336 lncRNA liver (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 1525.00 3.39 4.55 100.0 ENST00000756336 lncRNA liver (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 1195.00 2.66 3.56 100.0 ENST00000756336 lncRNA liver (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 379.00 0.84 1.13 100.0 ENST00000756336 lncRNA liver (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 13424.17 29.86 40.02 57.4 ENST00000756336 lncRNA liver (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 18880.45 41.99 56.28 69.41 ENST00000756336 lncRNA liver (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 609.29 1.36 1.82 20.82 ENST00000756336 lncRNA liver (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 543.13 1.21 1.62 39.3 ENST00000756336 lncRNA liver (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 563.00 1.25 1.68 100.0 ENST00000756336 lncRNA liver (Tissue)