ENCFF001RTU

Library Details

Organism: Homo Sapiens
Biosample: liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFV
Description: Part of ENCODE experiment ENCSR000AFV. The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 14145.00 87.08 42.17 96.98 MIR30D-201 miRNA liver (Tissue)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 928.00 5.71 2.77 67.79 MIR30D-201 miRNA liver (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 54111.00 68.30 161.30 100.0 MIR126-201 miRNA liver (Tissue)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 22053.00 27.83 65.74 94.82 MIR126-201 miRNA liver (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 333.00 35.09 0.99 100.0 MIR374A-201 miRNA liver (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 18.00 85.71 0.05 100.0 MIR31-201 miRNA liver (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 314.00 0.66 0.94 90.23 RNA5S12-201 rRNA liver (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 103.00 0.22 0.31 100.0 RNA5S12-201 rRNA liver (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 23.00 0.05 0.07 37.1 RNA5S12-201 rRNA liver (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 14.00 0.03 0.04 100.0 RNA5S12-201 rRNA liver (Tissue)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 159.29 0.34 0.47 57.92 RNA5S12-201 rRNA liver (Tissue)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 44.00 0.09 0.13 91.67 RNA5S12-201 rRNA liver (Tissue)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 87.00 0.18 0.26 53.7 RNA5S12-201 rRNA liver (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 94.00 0.20 0.28 71.21 RNA5S12-201 rRNA liver (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 238.70 0.50 0.71 48.03 RNA5S12-201 rRNA liver (Tissue)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 213.56 0.45 0.64 67.37 RNA5S12-201 rRNA liver (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 38.00 0.08 0.11 51.35 RNA5S12-201 rRNA liver (Tissue)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 134.00 0.28 0.40 69.07 RNA5S12-201 rRNA liver (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 417.88 0.88 1.25 51.34 RNA5S12-201 rRNA liver (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 136.00 0.29 0.41 77.71 RNA5S12-201 rRNA liver (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 42.00 0.09 0.13 100.0 RNA5S12-201 rRNA liver (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 161.00 0.34 0.48 84.29 RNA5S12-201 rRNA liver (Tissue)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 998.00 2.10 2.98 99.2 RNA5S12-201 rRNA liver (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 379.00 0.80 1.13 91.33 RNA5S12-201 rRNA liver (Tissue)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 12173.00 25.63 36.29 99.93 RNA5S12-201 rRNA liver (Tissue)