ENCFF001RTU

Library Details

Organism: Homo Sapiens
Biosample: liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFV
Description: Part of ENCODE experiment ENCSR000AFV. The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 38394.00 44.71 114.45 83.2 NOP56-219 retained intron liver (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 2136.00 8.36 6.37 36.64 RNA5-8SN2-201 rRNA liver (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 51.71 0.20 0.15 47.44 RNA5-8SN2-201 rRNA liver (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 6.00 0.02 0.02 100.0 RNA5-8SN2-201 rRNA liver (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 237.00 0.93 0.71 100.0 RNA5-8SN2-201 rRNA liver (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 501.00 1.96 1.49 100.0 RNA5-8SN2-201 rRNA liver (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 4758.00 18.62 14.18 69.02 RNA5-8SN2-201 rRNA liver (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 60.98 0.24 0.18 55.95 RNA5-8SN2-201 rRNA liver (Tissue)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 75.00 89.29 0.22 100.0 MIR7974-201 miRNA liver (Tissue)
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 659.00 26.38 1.96 100.0 MIR376A1-201 miRNA liver (Tissue)
ENST00000616574.2 ENST00000616574.2_7_27_+ 7–27 903.00 36.15 2.69 100.0 MIR376A1-201 miRNA liver (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 2076.00 0.55 6.19 100.0 U2.3-201 snRNA liver (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 1286.78 0.34 3.84 34.5 U2.3-201 snRNA liver (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 222588.00 59.38 663.53 99.2 U2.3-201 snRNA liver (Tissue)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 3.00 0.00 0.01 100.0 U2.3-201 snRNA liver (Tissue)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 33049.00 8.82 98.52 81.23 U2.3-201 snRNA liver (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 37037.00 9.88 110.41 81.27 U2.3-201 snRNA liver (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 5434.00 1.45 16.20 86.87 U2.3-201 snRNA liver (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 2558.43 0.68 7.63 68.59 U2.3-201 snRNA liver (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 5540.00 1.48 16.51 100.0 U2.3-201 snRNA liver (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 27.00 0.01 0.08 100.0 U2.3-201 snRNA liver (Tissue)
ENST00000617785.1 ENST00000617785.1_1_75_+ 1–75 1433.00 0.38 4.27 100.0 U2.3-201 snRNA liver (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 287.00 0.08 0.86 100.0 U2.3-201 snRNA liver (Tissue)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 9459.90 2.52 28.20 53.82 U2.3-201 snRNA liver (Tissue)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 5139.00 1.37 15.32 37.7 U2.3-201 snRNA liver (Tissue)