ENCFF001RTT

Library Details

Organism: Homo Sapiens
Biosample: urinary bladder (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFP
Description: Part of ENCODE experiment ENCSR000AFP. The libraries contained in this experiment come from human fetal urinary bladder tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 584.00 59.11 1.57 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 48.00 0.00 0.13 97.96 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 906.00 11.83 2.44 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 966.00 12.61 2.60 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 1542.00 19.04 4.16 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 105.00 0.26 0.28 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 34.00 0.00 0.09 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 242.00 0.02 0.65 9.81 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 4299.00 33.63 11.59 63.76 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 4168.00 32.60 11.23 49.23 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 242.00 8.36 0.65 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 395768.00 69.72 1066.58 94.71 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 779.00 0.14 2.10 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 291.00 12.75 0.78 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 205.00 2.84 0.55 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 33.00 0.43 0.09 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 383.00 2.11 1.03 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 222.00 1.22 0.60 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 31.00 0.17 0.08 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 142.00 0.78 0.38 91.03 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 156.00 0.86 0.42 78.39 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 53.00 0.29 0.14 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 18709.00 45.28 50.42 56.39 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 1804.00 4.37 4.86 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 1503.00 3.61 4.05 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA urinary bladder (Tissue)