ENCFF001RTT

Library Details

Organism: Homo Sapiens
Biosample: urinary bladder (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFP
Description: Part of ENCODE experiment ENCSR000AFP. The libraries contained in this experiment come from human fetal urinary bladder tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 58.00 0.05 0.16 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 5.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 533.00 0.42 1.44 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 92511.00 73.00 249.31 80.24 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 42.00 0.03 0.11 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 1244.00 3.10 3.35 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 5706.00 32.81 15.38 50.81 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 251.00 0.65 0.68 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 170.00 2.61 0.46 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 615.00 9.43 1.66 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 3334.00 51.11 8.98 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 8.00 0.12 0.02 72.73 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 150.00 0.01 0.40 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 1419.00 33.63 3.82 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 2825.00 39.73 7.61 46.27 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 181.00 2.55 0.49 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 3281.00 46.15 8.84 53.73 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 922.00 30.02 2.48 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 4.00 0.13 0.01 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 1774.00 75.52 4.78 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 1209.00 80.33 3.26 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 2653.00 79.36 7.15 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 68.00 0.88 0.18 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 19.00 0.25 0.05 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 36.00 0.46 0.10 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA urinary bladder (Tissue)