ENCFF001RTT

Library Details

Organism: Homo Sapiens
Biosample: urinary bladder (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFP
Description: Part of ENCODE experiment ENCSR000AFP. The libraries contained in this experiment come from human fetal urinary bladder tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 52.00 34.44 0.14 100.0 ENST00000837997 lncRNA urinary bladder (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 14.00 9.27 0.04 100.0 ENST00000837997 lncRNA urinary bladder (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 10442.00 73.33 28.14 80.64 ENST00000839036 lncRNA urinary bladder (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 65.00 22.65 0.18 100.0 ENST00000849527 lncRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 68795.00 73.43 185.40 81.51 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 7.00 0.01 0.02 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 739.00 0.08 1.99 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 2302.00 64.95 6.20 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 314.00 8.86 0.85 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 51.00 3.02 0.14 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 25.00 2.60 0.07 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 3275.00 58.28 8.83 86.62 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 55.00 0.01 0.15 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 153.00 59.77 0.41 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 5518.00 32.39 14.87 94.7 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 65.00 0.38 0.18 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 371.00 2.18 1.00 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 2726.00 17.71 7.35 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 860.00 0.15 2.32 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 2233.00 0.39 6.02 92.96 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 99.00 0.02 0.27 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 313.00 0.06 0.84 77.48 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 121815.00 21.45 328.29 53.56 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 37.00 0.01 0.10 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA urinary bladder (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 13.00 0.00 0.04 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA urinary bladder (Tissue)