ENCFF001RTT

Library Details

Organism: Homo Sapiens
Biosample: urinary bladder (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFP
Description: Part of ENCODE experiment ENCSR000AFP. The libraries contained in this experiment come from human fetal urinary bladder tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 66.00 6.99 0.18 100.0 ENST00000817026 lncRNA urinary bladder (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 1955.00 4.56 5.27 100.0 ENST00000823279 lncRNA urinary bladder (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 666.17 1.56 1.80 43.51 ENST00000823279 lncRNA urinary bladder (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 1184.91 2.77 3.19 53.91 ENST00000823279 lncRNA urinary bladder (Tissue)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 218.00 0.51 0.59 100.0 ENST00000823279 lncRNA urinary bladder (Tissue)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 3492.00 8.15 9.41 99.29 ENST00000823279 lncRNA urinary bladder (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 1343.11 3.14 3.62 46.81 ENST00000823279 lncRNA urinary bladder (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 1335.53 3.12 3.60 37.62 ENST00000823279 lncRNA urinary bladder (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 1770.00 4.13 4.77 81.83 ENST00000823279 lncRNA urinary bladder (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 9316.17 21.75 25.11 59.95 ENST00000823279 lncRNA urinary bladder (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 2588.82 6.04 6.98 18.67 ENST00000823801 lncRNA urinary bladder (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 19647.00 28.56 52.95 32.13 ENST00000827714 lncRNA urinary bladder (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 41496.00 60.33 111.83 67.87 ENST00000827714 lncRNA urinary bladder (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 1122.00 2.07 3.02 100.0 GAS5-377 lncRNA urinary bladder (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 791.00 1.46 2.13 100.0 GAS5-377 lncRNA urinary bladder (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 1297.00 2.39 3.50 100.0 GAS5-377 lncRNA urinary bladder (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 48208.00 88.89 129.92 100.0 GAS5-377 lncRNA urinary bladder (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 33744.00 95.78 90.94 100.0 MIR205HG-245 lncRNA urinary bladder (Tissue)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 288.00 12.74 0.78 100.0 TAF12-DT-204 lncRNA urinary bladder (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 189005.00 92.99 509.36 99.69 ZFAS1-238 lncRNA urinary bladder (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 1303.00 0.64 3.51 100.0 ZFAS1-238 lncRNA urinary bladder (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 3939.00 1.94 10.62 100.0 ZFAS1-238 lncRNA urinary bladder (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 935.00 0.46 2.52 100.0 ZFAS1-238 lncRNA urinary bladder (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 5129.00 8.08 13.82 100.0 ZFAS1-242 lncRNA urinary bladder (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 55080.00 86.82 148.44 100.0 ZFAS1-242 lncRNA urinary bladder (Tissue)