ENCFF001RTT

Library Details

Organism: Homo Sapiens
Biosample: urinary bladder (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFP
Description: Part of ENCODE experiment ENCSR000AFP. The libraries contained in this experiment come from human fetal urinary bladder tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 101341.00 48.19 273.11 99.04 SNHG12-223 lncRNA urinary bladder (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 6916.00 0.32 18.64 100.0 SNHG25-206 lncRNA urinary bladder (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 1326208.00 60.58 3574.08 61.92 SNHG25-206 lncRNA urinary bladder (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 2420.00 0.11 6.52 100.0 SNHG25-206 lncRNA urinary bladder (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 265.10 0.01 0.71 58.14 SNHG25-206 lncRNA urinary bladder (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 622.08 0.03 1.68 29.5 SNHG25-206 lncRNA urinary bladder (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 364.89 0.02 0.98 14.76 SNHG25-206 lncRNA urinary bladder (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 2885.00 0.13 7.77 50.86 SNHG25-206 lncRNA urinary bladder (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 293.00 0.01 0.79 100.0 SNHG25-206 lncRNA urinary bladder (Tissue)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 665.00 73.97 1.79 100.0 ENST00000778783 lncRNA urinary bladder (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 3913.00 83.36 10.55 87.48 MIR155HG-205 lncRNA urinary bladder (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 1225.00 70.85 3.30 100.0 ENST00000784740 lncRNA urinary bladder (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 63.00 0.90 0.17 100.0 ENST00000785178 lncRNA urinary bladder (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 163.00 8.20 0.44 85.79 ENST00000786284 lncRNA urinary bladder (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 226.00 11.36 0.61 100.0 ENST00000786284 lncRNA urinary bladder (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 27.00 1.36 0.07 16.77 ENST00000786284 lncRNA urinary bladder (Tissue)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 363.00 26.85 0.98 78.23 ENST00000788343 lncRNA urinary bladder (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 7092.47 26.63 19.11 45.23 ENST00000797550 lncRNA urinary bladder (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 4738.81 17.79 12.77 30.22 ENST00000797550 lncRNA urinary bladder (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 2139.00 8.03 5.76 46.9 ENST00000797550 lncRNA urinary bladder (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 246147.00 79.82 663.36 89.63 MIR181A1HG-212 lncRNA urinary bladder (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 1553.00 0.50 4.19 100.0 MIR181A1HG-212 lncRNA urinary bladder (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 63.00 5.66 0.17 100.0 C19orf48P-218 lncRNA urinary bladder (Tissue)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 421.00 37.83 1.13 100.0 C19orf48P-218 lncRNA urinary bladder (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 31215.00 87.65 84.12 96.01 SNHG18-220 lncRNA urinary bladder (Tissue)