ENCFF001RTT

Library Details

Organism: Homo Sapiens
Biosample: urinary bladder (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFP
Description: Part of ENCODE experiment ENCSR000AFP. The libraries contained in this experiment come from human fetal urinary bladder tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 12050.00 35.79 32.47 93.3 SNHG14-241 lncRNA urinary bladder (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 201289.00 96.80 542.47 100.0 MEG8-228 lncRNA urinary bladder (Tissue)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 2658.00 21.59 7.16 100.0 SNHG14-254 lncRNA urinary bladder (Tissue)
ENST00000658769.1 ENST00000658769.1_2_96_+ 2–96 3416.00 18.10 9.21 100.0 SNHG14-261 lncRNA urinary bladder (Tissue)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 6830.00 36.19 18.41 89.46 SNHG14-261 lncRNA urinary bladder (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 156.00 3.86 0.42 100.0 LIMD1-AS1-204 lncRNA urinary bladder (Tissue)
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 8.00 0.20 0.02 100.0 LIMD1-AS1-204 lncRNA urinary bladder (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 1068.00 26.44 2.88 86.2 LIMD1-AS1-204 lncRNA urinary bladder (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 117835.00 74.24 317.56 94.21 MIR99AHG-262 lncRNA urinary bladder (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 12264.00 7.73 33.05 100.0 MIR99AHG-262 lncRNA urinary bladder (Tissue)
ENST00000660376.1 ENST00000660376.1_1_78_+ 1–78 18.00 3.09 0.05 100.0 SNHG14-266 lncRNA urinary bladder (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 775.00 49.97 2.09 100.0 SNHG14-270 lncRNA urinary bladder (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 347.00 0.55 0.94 100.0 SNHG14-275 lncRNA urinary bladder (Tissue)
ENST00000661688.1 ENST00000661688.1_965_986_+ 965–986 9.00 0.53 0.02 100.0 MIR9-2HG-225 lncRNA urinary bladder (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 1191.00 69.98 3.21 86.81 MIR9-2HG-225 lncRNA urinary bladder (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 2373.00 25.44 6.40 100.0 MEG8-233 lncRNA urinary bladder (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 3038.00 32.57 8.19 100.0 MEG8-233 lncRNA urinary bladder (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 2199.00 5.00 5.93 100.0 SNHG14-278 lncRNA urinary bladder (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 31841.00 72.46 85.81 91.93 SNHG14-278 lncRNA urinary bladder (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 6164.00 47.81 16.61 100.0 MEG8-234 lncRNA urinary bladder (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 991.00 7.69 2.67 100.0 MEG8-234 lncRNA urinary bladder (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 1593.00 81.36 4.29 100.0 SNHG17-252 lncRNA urinary bladder (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 5090.00 29.38 13.72 60.42 SNHG14-288 lncRNA urinary bladder (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 10093.00 58.26 27.20 91.09 SNHG14-288 lncRNA urinary bladder (Tissue)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 29.00 5.18 0.08 100.0 SNHG14-295 lncRNA urinary bladder (Tissue)