ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 114.00 0.04 0.22 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 14.00 13.33 0.03 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 1220.00 18.26 2.38 96.29 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 19.00 0.28 0.04 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 147.00 2.20 0.29 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 3569.00 24.56 6.96 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 5757.00 3.87 11.22 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 5801.00 3.90 11.31 89.36 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 133.00 0.09 0.26 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 610.00 0.41 1.19 71.43 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 17832.00 12.00 34.76 47.3 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 202.00 0.14 0.39 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 65.00 0.04 0.13 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 112.00 32.46 0.22 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 381.00 0.15 0.74 95.73 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 3231.00 54.03 6.30 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 463.00 7.74 0.90 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 511.00 14.62 1.00 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 161.00 1.42 0.31 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 68.00 0.03 0.13 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 197.00 0.08 0.38 2.1 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 566.00 18.12 1.10 86.41 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 216.00 6.91 0.42 27.62 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 699.00 9.12 1.36 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 68612.00 46.32 133.73 90.48 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA tongue (Tissue)