ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 3844.00 55.76 7.49 64.59 ENST00000827714 lncRNA tongue (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 3369.00 5.02 6.57 100.0 GAS5-377 lncRNA tongue (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 1789.00 2.66 3.49 100.0 GAS5-377 lncRNA tongue (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 4521.00 6.73 8.81 100.0 GAS5-377 lncRNA tongue (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 49417.00 73.59 96.32 100.0 GAS5-377 lncRNA tongue (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 103640.00 94.57 202.00 100.0 MIR205HG-245 lncRNA tongue (Tissue)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 72.00 2.33 0.14 100.0 TAF12-DT-204 lncRNA tongue (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 219382.00 88.29 427.59 99.62 ZFAS1-238 lncRNA tongue (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 2316.00 0.93 4.51 100.0 ZFAS1-238 lncRNA tongue (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 9290.00 3.74 18.11 100.0 ZFAS1-238 lncRNA tongue (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 1859.00 0.75 3.62 100.0 ZFAS1-238 lncRNA tongue (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 8465.00 9.75 16.50 100.0 ZFAS1-242 lncRNA tongue (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 71657.00 82.53 139.67 100.0 ZFAS1-242 lncRNA tongue (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 211.00 17.84 0.41 100.0 ENST00000837997 lncRNA tongue (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 495.00 41.84 0.96 100.0 ENST00000837997 lncRNA tongue (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 4895.00 65.02 9.54 74.38 ENST00000839036 lncRNA tongue (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 67.00 9.84 0.13 100.0 ENST00000849527 lncRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 9586.00 55.44 18.68 82.26 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 35.00 0.20 0.07 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 2753.00 0.96 5.37 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 204.00 1.80 0.40 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 7597.00 67.19 14.81 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 63.00 10.36 0.12 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 27.00 1.20 0.05 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA tongue (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 434.00 34.72 0.85 81.58 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA tongue (Tissue)