ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 3465.00 0.39 6.75 46.54 SNHG32-223 lncRNA tongue (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 857624.00 95.33 1671.58 100.0 SNHG32-223 lncRNA tongue (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 72137.00 70.30 140.60 97.79 SNHG32-227 lncRNA tongue (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 2259.00 2.20 4.40 100.0 SNHG32-227 lncRNA tongue (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 4118.00 4.01 8.03 100.0 SNHG32-227 lncRNA tongue (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 5991.00 5.84 11.68 100.0 SNHG32-227 lncRNA tongue (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 1527.00 74.56 2.98 100.0 B4GALT1-203 nonsense mediated decay tongue (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 2431.00 2.06 4.74 100.0 ENST00000722183 lncRNA tongue (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 79743.00 67.50 155.43 91.56 ENST00000722183 lncRNA tongue (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 6632.00 5.61 12.93 100.0 ENST00000722183 lncRNA tongue (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 224.00 78.05 0.44 100.0 MIR34BHG-202 lncRNA tongue (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 3309.00 77.20 6.45 83.56 THBS3-AS1-228 lncRNA tongue (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 4917.00 63.08 9.58 100.0 MIR200CHG-202 lncRNA tongue (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 845.00 10.84 1.65 100.0 MIR200CHG-202 lncRNA tongue (Tissue)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 253.00 2.03 0.49 100.0 SNHG16-266 lncRNA tongue (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 2108.00 16.92 4.11 100.0 SNHG16-266 lncRNA tongue (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 1076.00 8.64 2.10 100.0 SNHG16-266 lncRNA tongue (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 510.00 4.09 0.99 100.0 SNHG16-266 lncRNA tongue (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 14189.00 61.18 27.66 100.0 MEG8-261 lncRNA tongue (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 1401.00 38.47 2.73 100.0 NR2F2-AS1-327 lncRNA tongue (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 377.00 4.68 0.73 38.51 ENST00000747675 lncRNA tongue (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 2447.00 30.35 4.77 100.0 ENST00000747675 lncRNA tongue (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 231.00 2.86 0.45 37.99 ENST00000747675 lncRNA tongue (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 371.00 4.60 0.72 49.6 ENST00000747675 lncRNA tongue (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 762.00 9.45 1.49 100.0 ENST00000747675 lncRNA tongue (Tissue)