ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 2344.00 73.48 4.57 100.0 SNORD70B-201 snoRNA tongue (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 3115.00 38.85 6.07 92.76 RNY4P18-201 misc RNA tongue (Tissue)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 177384.00 93.81 345.74 100.0 SNORD90-201 snoRNA tongue (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 2551.00 1.35 4.97 26.28 SNORD90-201 snoRNA tongue (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 4227.00 1.92 8.24 100.0 SNORD69-201 snoRNA tongue (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 200935.00 91.05 391.64 100.0 SNORD69-201 snoRNA tongue (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 2497.00 1.13 4.87 100.0 SNORD69-201 snoRNA tongue (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 1387.00 0.63 2.70 100.0 SNORD69-201 snoRNA tongue (Tissue)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 1105.00 45.79 2.15 63.25 SNORD70-201 snoRNA tongue (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 281.00 1.29 0.55 100.0 B4GALNT2-202 protein coding tongue (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 14950.00 68.75 29.14 77.16 B4GALNT2-202 protein coding tongue (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 3593.00 89.80 7.00 100.0 NDE1-202 protein coding tongue (Tissue)
ENST00000401172.1 ENST00000401172.1_46_67_+ 46–67 1799.00 92.64 3.51 100.0 MIR208B-201 miRNA tongue (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 17754.00 67.32 34.60 100.0 MIR450B-201 miRNA tongue (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 1405.00 54.39 2.74 100.0 MIR887-201 miRNA tongue (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 79737.00 89.32 155.41 100.0 MIR889-201 miRNA tongue (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 3268.00 70.84 6.37 100.0 SNORD111-201 snoRNA tongue (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 3379.00 62.55 6.59 84.45 SNORD88A-201 snoRNA tongue (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 900.00 95.64 1.75 100.0 MIR548K-201 miRNA tongue (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 444.00 57.22 0.87 100.0 MIR320B2-201 miRNA tongue (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 113.00 86.26 0.22 100.0 MIR1271-201 miRNA tongue (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 113.00 0.09 0.22 100.0 SNORD100-201 snoRNA tongue (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 114319.00 92.81 222.82 100.0 SNORD100-201 snoRNA tongue (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 1468.00 1.19 2.86 100.0 SNORD100-201 snoRNA tongue (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 434.00 0.35 0.85 100.0 SNORD100-201 snoRNA tongue (Tissue)