ENCFF001RMV

Library Details

Organism: Homo Sapiens
Biosample: tongue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGF
Description: Part of ENCODE experiment ENCSR000AGF. The libraries contained in this experiment come from human fetal tongue tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 6473.00 0.89 12.62 95.57 MT-TE-201 Mt tRNA tongue (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 880.00 0.12 1.72 100.0 MT-TE-201 Mt tRNA tongue (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 8065.00 1.11 15.72 100.0 MT-TE-201 Mt tRNA tongue (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 167.00 0.02 0.33 100.0 MT-TE-201 Mt tRNA tongue (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 6348.00 0.87 12.37 90.2 MT-TE-201 Mt tRNA tongue (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 340.00 0.05 0.66 4.99 MT-TE-201 Mt tRNA tongue (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 600717.00 82.41 1170.85 90.83 MT-TE-201 Mt tRNA tongue (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 2.00 22.22 0.00 100.0 MIR196A1-201 miRNA tongue (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 3307.00 39.03 6.45 100.0 MT-RNR1-201 Mt rRNA tongue (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 5340.00 78.00 10.41 100.0 MIR454-201 miRNA tongue (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 752.00 19.41 1.47 100.0 MIR501-201 miRNA tongue (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 5189.00 88.84 10.11 100.0 MIR769-201 miRNA tongue (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 87.00 67.97 0.17 100.0 KRTAP19-1-201 protein coding tongue (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 1431.00 29.59 2.79 100.0 MIR708-201 miRNA tongue (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 313.00 80.05 0.61 100.0 MIR509-3-201 miRNA tongue (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 40362.00 72.95 78.67 100.0 MIR543-201 miRNA tongue (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 249.00 93.61 0.49 100.0 MIR301B-201 miRNA tongue (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 6937.00 45.53 13.52 71.33 RNU1-82P-201 snRNA tongue (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 1266.00 3.68 2.47 100.0 SNORD66-201 snoRNA tongue (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 12382.00 35.99 24.13 100.0 SNORD66-201 snoRNA tongue (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 205.00 0.60 0.40 100.0 SNORD66-201 snoRNA tongue (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 4600.00 13.37 8.97 80.9 SNORD66-201 snoRNA tongue (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 1567.00 77.61 3.05 100.0 U3.17-201 snoRNA tongue (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 6480.00 72.17 12.63 100.0 SNORD17-201 snoRNA tongue (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 206.00 68.90 0.40 100.0 SNORD72-201 snoRNA tongue (Tissue)