ENCFF001RMU

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 77.00 0.73 0.16 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 3892.00 37.12 8.16 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 3543.00 33.79 7.43 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 2.00 0.02 0.00 40.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 46.00 0.00 0.10 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 2323.00 55.73 4.87 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 3748.00 55.63 7.86 63.46 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 49.00 0.73 0.10 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 2158.00 32.03 4.53 36.54 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 102.00 15.04 0.21 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 1134.00 74.31 2.38 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 674.00 73.26 1.41 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 72.00 25.09 0.15 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 2.00 0.07 0.00 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 9.00 0.30 0.02 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 33.00 1.09 0.07 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 18.00 0.59 0.04 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 10.00 0.33 0.02 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 5.00 0.17 0.01 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 956.00 0.02 2.00 59.6 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 1945.00 0.05 4.08 65.03 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 3902.00 0.10 8.18 90.32 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 1257.00 13.61 2.64 23.49 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 4850.00 98.98 10.17 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 954.00 59.18 2.00 95.98 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA metanephros (Tissue)