ENCFF001RMU

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 300.00 31.61 0.63 89.55 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 121.00 12.75 0.25 28.74 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 30.00 3.06 0.06 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 624654.00 72.30 1310.04 95.52 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 309.00 0.04 0.65 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 139.00 19.12 0.29 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 31.00 1.02 0.07 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 4.00 0.13 0.01 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 54.00 0.15 0.11 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 18.00 0.05 0.04 51.43 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 84.00 0.23 0.18 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 370.00 1.03 0.78 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 139.00 0.39 0.29 99.29 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 56.00 0.16 0.12 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 45.00 1.58 0.09 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 616.00 21.61 1.29 33.23 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 30.00 1.00 0.06 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 141.00 0.07 0.30 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 194328.00 93.57 407.55 96.68 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 69.00 0.03 0.14 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 12.00 0.01 0.03 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 4.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 21.00 0.76 0.04 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 17237.00 50.37 36.15 57.0 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 7.00 0.27 0.01 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA metanephros (Tissue)