ENCFF001RMU

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 2230.00 96.62 4.68 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 221015.00 80.09 463.52 84.94 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 77.00 0.03 0.16 16.01 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 404.00 0.15 0.85 83.99 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 207.00 0.67 0.43 79.31 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 19032.12 61.45 39.91 65.55 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 9908.46 31.99 20.78 39.83 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 594403.00 98.28 1246.59 99.6 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 537.00 24.71 1.13 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 1238.00 43.44 2.60 91.23 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 30.00 0.00 0.06 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 69.00 0.01 0.14 54.33 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 231.00 56.62 0.48 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 28.00 5.27 0.06 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 1620213.00 99.27 3397.95 99.8 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 887.00 1.12 1.86 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 68163.00 85.82 142.95 93.01 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 1091.00 74.27 2.29 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 3089.00 90.88 6.48 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 575.00 29.34 1.21 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 287525.00 99.02 603.00 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 11695.00 98.57 24.53 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 754.00 26.00 1.58 82.68 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 24.00 0.83 0.05 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 99.00 0.01 0.21 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA metanephros (Tissue)