ENCFF001RMU

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 3778.00 0.21 7.92 75.2 SNHG25-206 lncRNA metanephros (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 234.00 0.01 0.49 100.0 SNHG25-206 lncRNA metanephros (Tissue)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 132.00 73.74 0.28 100.0 ENST00000778783 lncRNA metanephros (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 3038.00 81.51 6.37 84.98 MIR155HG-205 lncRNA metanephros (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 4567.00 70.64 9.58 100.0 ENST00000784740 lncRNA metanephros (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 4.00 0.15 0.01 100.0 ENST00000785178 lncRNA metanephros (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 348.00 38.71 0.73 93.8 ENST00000786284 lncRNA metanephros (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 94.00 10.46 0.20 100.0 ENST00000786284 lncRNA metanephros (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 23.00 2.56 0.05 37.7 ENST00000786284 lncRNA metanephros (Tissue)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 74.00 30.96 0.16 77.08 ENST00000788343 lncRNA metanephros (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 15464.89 31.86 32.43 65.28 ENST00000797550 lncRNA metanephros (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 9610.13 19.80 20.15 40.56 ENST00000797550 lncRNA metanephros (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 5815.00 11.98 12.20 31.88 ENST00000797550 lncRNA metanephros (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 420116.00 86.53 881.08 93.83 MIR181A1HG-212 lncRNA metanephros (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 1526.00 0.31 3.20 100.0 MIR181A1HG-212 lncRNA metanephros (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 84.00 6.77 0.18 100.0 C19orf48P-218 lncRNA metanephros (Tissue)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 470.00 37.90 0.99 100.0 C19orf48P-218 lncRNA metanephros (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 14607.00 86.38 30.63 95.01 SNHG18-220 lncRNA metanephros (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 37.00 8.87 0.08 100.0 ENST00000817026 lncRNA metanephros (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 651.51 2.80 1.37 32.35 ENST00000823279 lncRNA metanephros (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 506.00 2.17 1.06 100.0 ENST00000823279 lncRNA metanephros (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 220.59 0.95 0.46 35.29 ENST00000823279 lncRNA metanephros (Tissue)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 111.00 0.48 0.23 100.0 ENST00000823279 lncRNA metanephros (Tissue)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 3199.00 13.73 6.71 99.29 ENST00000823279 lncRNA metanephros (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 2092.75 8.98 4.39 59.54 ENST00000823279 lncRNA metanephros (Tissue)