ENCFF001RMU

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 1111.59 4.77 2.33 38.04 ENST00000823279 lncRNA metanephros (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 1333.00 5.72 2.80 82.28 ENST00000823279 lncRNA metanephros (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 1648.16 7.07 3.46 41.83 ENST00000823279 lncRNA metanephros (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 2617.61 11.23 5.49 60.3 ENST00000823801 lncRNA metanephros (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 1317.00 47.73 2.76 55.41 ENST00000827714 lncRNA metanephros (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 1060.00 38.42 2.22 44.59 ENST00000827714 lncRNA metanephros (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 2308.00 3.12 4.84 100.0 GAS5-377 lncRNA metanephros (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 164.00 0.22 0.34 100.0 GAS5-377 lncRNA metanephros (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 1314.00 1.77 2.76 100.0 GAS5-377 lncRNA metanephros (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 68371.00 92.31 143.39 100.0 GAS5-377 lncRNA metanephros (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 1802.00 95.50 3.78 100.0 MIR205HG-245 lncRNA metanephros (Tissue)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 2156.00 51.54 4.52 100.0 TAF12-DT-204 lncRNA metanephros (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 262804.00 97.02 551.16 99.75 ZFAS1-238 lncRNA metanephros (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 300.00 0.11 0.63 100.0 ZFAS1-238 lncRNA metanephros (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 1044.00 0.39 2.19 100.0 ZFAS1-238 lncRNA metanephros (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 1308.00 0.48 2.74 100.0 ZFAS1-238 lncRNA metanephros (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 3420.00 6.23 7.17 100.0 ZFAS1-242 lncRNA metanephros (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 49986.00 91.11 104.83 100.0 ZFAS1-242 lncRNA metanephros (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 78.00 56.12 0.16 100.0 ENST00000837997 lncRNA metanephros (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 8.00 5.76 0.02 100.0 ENST00000837997 lncRNA metanephros (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 4041.00 75.36 8.47 82.45 ENST00000839036 lncRNA metanephros (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 56.00 24.78 0.12 100.0 ENST00000849527 lncRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 162174.00 87.75 340.11 91.89 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 42.00 0.02 0.09 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA metanephros (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 280.00 0.02 0.59 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA metanephros (Tissue)