ENCFF001RMU

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 119741.00 87.92 251.12 92.17 SNHG14-356 lncRNA metanephros (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 2261.00 1.87 4.74 48.59 LINC02806-241 lncRNA metanephros (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 17.00 0.01 0.04 100.0 LINC02806-241 lncRNA metanephros (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 102999.00 85.39 216.01 91.63 LINC02806-241 lncRNA metanephros (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 627.00 87.33 1.31 100.0 EHBP1-AS1-210 lncRNA metanephros (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 65.00 24.62 0.14 100.0 ENST00000770398 lncRNA metanephros (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 58.00 21.97 0.12 100.0 ENST00000770398 lncRNA metanephros (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 16.00 6.06 0.03 100.0 ENST00000770398 lncRNA metanephros (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 41.00 0.04 0.09 100.0 ENST00000771298 lncRNA metanephros (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 35.00 0.04 0.07 100.0 ENST00000771298 lncRNA metanephros (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 81668.00 84.71 171.28 87.52 ENST00000771298 lncRNA metanephros (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 85.00 0.09 0.18 100.0 ENST00000771298 lncRNA metanephros (Tissue)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 3906.00 69.73 8.19 100.0 ENST00000772672 lncRNA metanephros (Tissue)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 3.00 0.05 0.01 100.0 ENST00000772672 lncRNA metanephros (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 73.00 1.30 0.15 100.0 ENST00000772672 lncRNA metanephros (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 2410.00 75.43 5.05 100.0 ENST00000773843 lncRNA metanephros (Tissue)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 3.00 0.00 0.01 100.0 SNHG12-223 lncRNA metanephros (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 55334.00 44.38 116.05 93.23 SNHG12-223 lncRNA metanephros (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 68858.00 55.23 144.41 99.18 SNHG12-223 lncRNA metanephros (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 5810.00 0.32 12.18 100.0 SNHG25-206 lncRNA metanephros (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 1412259.00 76.73 2961.82 78.56 SNHG25-206 lncRNA metanephros (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 1827.00 0.10 3.83 100.0 SNHG25-206 lncRNA metanephros (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 427.51 0.02 0.90 44.16 SNHG25-206 lncRNA metanephros (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 1292.94 0.07 2.71 54.69 SNHG25-206 lncRNA metanephros (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 634.96 0.03 1.33 21.52 SNHG25-206 lncRNA metanephros (Tissue)