ENCFF001RMU

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 2.00 0.03 0.00 100.0 RNA5-8SN2-201 rRNA metanephros (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 110.00 1.45 0.23 100.0 RNA5-8SN2-201 rRNA metanephros (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 73.00 0.97 0.15 100.0 RNA5-8SN2-201 rRNA metanephros (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 2116.00 27.98 4.44 61.78 RNA5-8SN2-201 rRNA metanephros (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 106.51 1.41 0.22 53.25 RNA5-8SN2-201 rRNA metanephros (Tissue)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 1.00 100.00 0.00 100.0 MIR7974-201 miRNA metanephros (Tissue)
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 954.00 68.73 2.00 100.0 MIR376A1-201 miRNA metanephros (Tissue)
ENST00000616574.2 ENST00000616574.2_7_27_+ 7–27 108.00 7.78 0.23 100.0 MIR376A1-201 miRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 661.00 0.61 1.39 100.0 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 754.79 0.70 1.58 37.55 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 56438.00 52.19 118.36 98.86 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 5.00 0.00 0.01 100.0 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 13312.00 12.31 27.92 73.17 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 7056.00 6.53 14.80 85.89 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 2798.00 2.59 5.87 94.5 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 1248.78 1.15 2.62 62.13 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 63.00 0.06 0.13 100.0 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 11.00 0.01 0.02 100.0 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_1_75_+ 1–75 1033.00 0.96 2.17 100.0 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 67.00 0.06 0.14 100.0 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 6770.49 6.26 14.20 54.39 U2.3-201 snRNA metanephros (Tissue)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 3228.57 2.99 6.77 42.17 U2.3-201 snRNA metanephros (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 1113.00 1.06 2.33 100.0 U2.6-201 snRNA metanephros (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 872.00 1.13 1.83 57.22 ENST00000619323 lncRNA metanephros (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 74767.00 96.59 156.80 98.43 ENST00000619323 lncRNA metanephros (Tissue)