ENCFF001RMU

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 7.00 43.75 0.01 100.0 ENST00000597420 lncRNA metanephros (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 31.00 0.96 0.07 100.0 RPS11-206 retained intron metanephros (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 1749.00 54.00 3.67 100.0 RPS11-206 retained intron metanephros (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 140340.00 64.32 294.32 66.36 CARMN-209 lncRNA metanephros (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 1958.00 44.26 4.11 100.0 ENST00000602478 lncRNA metanephros (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 11.00 9.65 0.02 100.0 PPFIA1P1-201 processed pseudogene metanephros (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 4339.00 37.43 9.10 100.0 SNORD114-21-201 snoRNA metanephros (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 4817.00 41.55 10.10 100.0 SNORD114-21-201 snoRNA metanephros (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 1.00 0.90 0.00 100.0 SNORD115-40-201 snoRNA metanephros (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 29349.00 98.77 61.55 100.0 MIR98-201 miRNA metanephros (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 50422.00 97.15 105.75 100.0 SNORD113-5-201 snoRNA metanephros (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 1634.00 89.73 3.43 100.0 MIR15A-201 miRNA metanephros (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 1846.00 85.15 3.87 100.0 MIR376C-201 miRNA metanephros (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 1027.00 58.09 2.15 100.0 SNHG21-206 retained intron metanephros (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 280.00 52.73 0.59 100.0 SNORD11B-201 snoRNA metanephros (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 1706.00 65.69 3.58 100.0 SNORD91B-201 snoRNA metanephros (Tissue)
ENST00000608502.2 ENST00000608502.2_858_879_+ 858–879 1.00 5.56 0.00 100.0 MIR219A2HG-201 lncRNA metanephros (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 9784.00 50.69 20.52 63.69 SNORD91A-201 snoRNA metanephros (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 139111.00 47.63 291.75 97.6 MIR486-1-201 miRNA metanephros (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 30492.00 35.80 63.95 75.54 NOP56-219 retained intron metanephros (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 1017.00 1.19 2.13 100.0 NOP56-219 retained intron metanephros (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 625.00 0.73 1.31 100.0 NOP56-219 retained intron metanephros (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 30973.00 36.36 64.96 80.17 NOP56-219 retained intron metanephros (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 1309.00 17.31 2.75 47.44 RNA5-8SN2-201 rRNA metanephros (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 95.22 1.26 0.20 47.61 RNA5-8SN2-201 rRNA metanephros (Tissue)