ENCFF001RMU

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 2644.00 1.90 5.55 100.0 SNORD69-201 snoRNA metanephros (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 1274.00 0.91 2.67 100.0 SNORD69-201 snoRNA metanephros (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 1207.00 0.87 2.53 100.0 SNORD69-201 snoRNA metanephros (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 130937.00 93.89 274.60 100.0 SNORD69-201 snoRNA metanephros (Tissue)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 1789.00 52.49 3.75 64.05 SNORD70-201 snoRNA metanephros (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 21.00 0.78 0.04 100.0 B4GALNT2-202 protein coding metanephros (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 1756.00 65.55 3.68 79.93 B4GALNT2-202 protein coding metanephros (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 1854.00 92.47 3.89 100.0 NDE1-202 protein coding metanephros (Tissue)
ENST00000401172.1 ENST00000401172.1_46_67_+ 46–67 148.00 94.27 0.31 100.0 MIR208B-201 miRNA metanephros (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 2574.00 70.19 5.40 100.0 MIR450B-201 miRNA metanephros (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 430.00 50.47 0.90 100.0 MIR887-201 miRNA metanephros (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 4656.00 91.19 9.76 100.0 MIR889-201 miRNA metanephros (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 2879.00 78.45 6.04 100.0 SNORD111-201 snoRNA metanephros (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 4124.00 61.98 8.65 83.8 SNORD88A-201 snoRNA metanephros (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 230.00 93.88 0.48 100.0 MIR548K-201 miRNA metanephros (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 250.00 61.27 0.52 100.0 MIR320B2-201 miRNA metanephros (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 2459.00 92.86 5.16 100.0 MIR1271-201 miRNA metanephros (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 34.00 0.06 0.07 100.0 SNORD100-201 snoRNA metanephros (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 48434.00 89.09 101.58 100.0 SNORD100-201 snoRNA metanephros (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 2705.00 4.98 5.67 100.0 SNORD100-201 snoRNA metanephros (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 425.00 0.78 0.89 100.0 SNORD100-201 snoRNA metanephros (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 1826.00 54.61 3.83 100.0 SNORD111B-201 snoRNA metanephros (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 607.00 25.00 1.27 100.0 RNU2-36P-201 snRNA metanephros (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 39.00 1.61 0.08 100.0 RNU2-36P-201 snRNA metanephros (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 90996.00 96.28 190.84 98.99 SNORD19C-201 snoRNA metanephros (Tissue)