ENCFF001RMU

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 1251.00 0.11 2.62 100.0 MT-TE-201 Mt tRNA metanephros (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 1020139.00 86.38 2139.46 90.91 MT-TE-201 Mt tRNA metanephros (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 8073.00 58.76 16.93 100.0 MIR196A1-201 miRNA metanephros (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 2077.00 18.67 4.36 100.0 MT-RNR1-201 Mt rRNA metanephros (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 291.00 2.62 0.61 100.0 MT-RNR1-201 Mt rRNA metanephros (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 3104.00 87.49 6.51 100.0 MIR454-201 miRNA metanephros (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 10555.00 69.83 22.14 100.0 MIR501-201 miRNA metanephros (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 3083.00 91.73 6.47 100.0 MIR769-201 miRNA metanephros (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 20.00 43.48 0.04 100.0 KRTAP19-1-201 protein coding metanephros (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 1400.00 54.12 2.94 100.0 MIR708-201 miRNA metanephros (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 3153.00 88.52 6.61 100.0 MIR509-3-201 miRNA metanephros (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 554.00 58.19 1.16 100.0 MIR543-201 miRNA metanephros (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 171.00 98.28 0.36 100.0 MIR301B-201 miRNA metanephros (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 1025.00 50.59 2.15 69.4 RNU1-82P-201 snRNA metanephros (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 3879.00 33.18 8.14 84.82 SNORD66-201 snoRNA metanephros (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 17.00 0.15 0.04 100.0 SNORD66-201 snoRNA metanephros (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 346.00 2.96 0.73 100.0 SNORD66-201 snoRNA metanephros (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 3739.00 31.98 7.84 100.0 SNORD66-201 snoRNA metanephros (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 246.00 64.06 0.52 100.0 U3.17-201 snoRNA metanephros (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 8382.00 79.81 17.58 100.0 SNORD17-201 snoRNA metanephros (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 97.00 28.03 0.20 100.0 SNORD72-201 snoRNA metanephros (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 2848.00 79.35 5.97 100.0 SNORD70B-201 snoRNA metanephros (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 4147.00 69.74 8.70 97.03 RNY4P18-201 misc RNA metanephros (Tissue)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 43209.00 93.67 90.62 100.0 SNORD90-201 snoRNA metanephros (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 880.00 1.91 1.85 22.35 SNORD90-201 snoRNA metanephros (Tissue)