ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 78.00 5.35 0.10 100.0 RNA5SP77-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 329157.00 33.44 434.18 100.0 SNORD114-22-201 snoRNA thyroid gland (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 618833.00 62.87 816.28 99.11 SNORD114-22-201 snoRNA thyroid gland (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 4168.00 5.63 5.50 100.0 SNORD6-201 snoRNA thyroid gland (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 62273.00 84.13 82.14 100.0 SNORD6-201 snoRNA thyroid gland (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 2705.00 15.06 3.57 100.0 RNY3-201 misc RNA thyroid gland (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 33148.43 12.42 43.73 57.25 SNORD82-201 snoRNA thyroid gland (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 3466.00 1.30 4.57 100.0 SNORD82-201 snoRNA thyroid gland (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 1754.00 0.66 2.31 100.0 SNORD82-201 snoRNA thyroid gland (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 22586.00 8.46 29.79 90.62 SNORD82-201 snoRNA thyroid gland (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 498.00 0.19 0.66 100.0 SNORD82-201 snoRNA thyroid gland (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 159092.00 59.61 209.85 98.6 SNORD82-201 snoRNA thyroid gland (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 24437.47 9.16 32.23 42.2 SNORD82-201 snoRNA thyroid gland (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 68410.00 90.75 90.24 93.32 MIR146B-201 miRNA thyroid gland (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 178.00 44.50 0.23 100.0 SNHG20-201 lncRNA thyroid gland (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 684.00 18.86 0.90 100.0 ATP5MK-205 protein coding thyroid gland (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 1284.00 35.41 1.69 100.0 ATP5MK-205 protein coding thyroid gland (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 262.00 29.41 0.35 100.0 LINC01556-201 lncRNA thyroid gland (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 999.00 72.29 1.32 100.0 ATAD3A-202 protein coding thyroid gland (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 7463.00 45.85 9.84 70.38 TMC5-202 protein coding thyroid gland (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 55.00 75.34 0.07 100.0 ZMYM2-203 protein coding thyroid gland (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 1924.00 10.79 2.54 100.0 RNVU1-7-201 snRNA thyroid gland (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 11072.00 49.41 14.60 100.0 SNORD24-201 snoRNA thyroid gland (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 965.00 65.25 1.27 100.0 Y_RNA.389-201 misc RNA thyroid gland (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 3349.00 2.68 4.42 100.0 SNORD101-201 snoRNA thyroid gland (Tissue)